Id Trinity | FTRINITY_DN53767_c1_g1_i10 |
---|---|
Name Transcript | Ll_transcript_123700 |
Sequence | AAATTATCAACCTTGGGCTGAAGTCCAAGGCCTATTCAAAATAGTCATAAAGCCCATGGGCTCGTAACTCCTGAGCAAACGTTGGTTCTTGTTCTTCTTT TTCGTCTCTCGCTCTCGGACCCCACTTTCTAAGAACCCATTGGTTTTTTGATTTCGTAAGAGGACATGGTTAAGCGGAAGCAGCAGAAGAAGCAATCACA CAAGAAGCAAGAACAACCGCAAAATAAGAAGCAAGGAAAACAGGATGATGCTTCACAATTTTGGACTCAGTTGGATGTTCTGGGCCTACGCATTGTTGAA GTGACAGCAGATGGCAATTGTTTCTTCAGAGCCCTTGCTGATCAGTTGGAGGGCAATGAGGAGGAACATCGAAAGTACCGCAGCATGATAGTGAAACACA TATTGGACAACCGAGAAATGTTTGAGCCCTTTATTGAAGACGAAGTCCCATTCGATGAATATTGCCGATCCATGGAAACTGGTGGTACATGGGCTGGACA TATGGAATTGCAGGCAGCTTCTCTAGTAACACATAGTAATATATGCATTCACCGGAGCATGACTCCTCGCTGGTACATAAGAAATTTTGATGATCGTGGA GCTCGTATGATCCATTTGTAAGTACTATGGAGTTTATGATTGTTATGTGAAATTGCACTGCACACTATTTTATCCAAGGCTTTGAGCAGTATATCGATCT TTTTGAAATGCTATATCTATGACTAAGGAAGAAGTAAATAGTTTATGTCTTCAGCTTGCTGGCAGACTCTGGGTCTTAATACCTTAGAATCACATGACCA CTGGAAAAAGTTACATTCATTTATCTTCTAATCTTGTCAATTCAAATAAAATCCAATGGTTTAGATCCTCACCTTTGACAATAACAAGGTGTTCTAAGCT GATATAGTCCCTATACATAAAGGCACACACACACAAACACATAGAATAGTAGAGTAATAGTGTATGCTGGTCATGTAGATCAAGGTACGGTGAATTATAA TTGGGTGGTGATATAGTTTTATCGCACGATTCATATTGCGAATTGATGCAGCTTTCATCCCCAACAATGCAAATCACAATTCTTATGTGTCTAAAACAGG CAGGTTTCCTGGAAACCCTAGAAAGATGATTTTTTTCTTCTTGTTTTTTTAAAACCCACTTCAGATGGTCTGATTTTACCATTCAGAATGGGCCCAAACC TAATTTCTTACCCTTTGCTCATTTAACATCTGAATTTACTTCTCCCACTTGTAAAAACTATGACGTGAGTATCATCTTCGGTCACTGCCATTTCTTTGTT TTAGCCTACATCTTCTTTATTCCTTTTGTTGTTGTTTCAACATATTAATTAAGATGAGTCTTATGACTTGAATTTGTGTTTTTTACTGTATGTTTGTTGT TATGAGTCTTATGACTCTTATTTAAGTACTTTTAATTATTGATCATGAATCTTACGGTTCACAATATGATTCCATACATGATTAAGAAAACAGGCCTTCC GATTCATAATCTGAATCCCGTTTCGACTACCATGATATAATGCAGTTGGGTTATTTGGAAGGAAAATTGATAAAATAAAGGAGCAAACATCCATTCAGCT TTTGTGAATGGAAAAATCTTGTTTATTAATCATTCCAAGGACCTAGAACCTATGTTTAATTATTTTTGTGATCCTATTTGTATGTGGCTGGAGTAGTATG TACCTCACAGTTTCCTATTAGGTGAATCAGAACATCTTATCATTTTAGGGAAGACAACCCCTGTAATTTTGTTCTGTGTGCAAGTGTGCAATAGATCTAT TTAAACATGAAATTAAAATTTAAGATGCACACAACAATCAGTATTTTCTCTGGTGGATGGCATTGAGGACTTGCGGTGAACTATATATTGTCCTGCGTGC AATATATTGCGAATTTGTGACAAAGATGGGTGGTGCACAAAGAAGGAACAACATATGCATGAAATTGTCAGAAGATAGTATTTCTAACACAATTGTTGAA ACTTGTTTAAGAGTAGTAGTACCCATAAACTATGAGGGTGGATGAGATTTCTCACCTTCAAACCCCCATTTCACTCATGGTGCTGCCAAGGCACCATTTG TGTGATGGCTGCCATTACAAAGCTGCCATACTTCAACATTCATACGAAAGGTTTCAGAAAGTCTGCCATGCCGTACGACCATGGCCGTCATTTTATATGA ACTTTATTTGTTTATGTTTGGGTATATATGTTTTTCCAGGTCTTATCATGATGGGGAGCATTATAATAGCGTGCGGTTAAAGGATGATCCTTGTGACGGG CCTGCAAAGTCAATTGTAATTAAGGCTGATGCTGATCTTTCAGCGACATCACATCAAGCAAAAGTTACAGCTAACAAATCCCGTGAGCGGACTGATAAAG GAACTTGTCTGCCAGGGTCCATAAAGTTGGTTATGGCTGGAAGTGGATGTGAAAACACTGAAAAAGTCGAACAGATTCTAGAGCAGGTAAATGGAAATGT TGACGCTGCAATAGAGTTTCTTATAGCAGAACAAGGAAGAGAAGAGTGCTCTGCAACATCTGATTTCTTTCCGAGTCAGGCTGATGCTGATGGACATGAT GAAAATGAGAATCTCGAACACAAAGAACACACAGTAGAGGACAGCGTTAATGCCAAATCAAATGATAGGTCCACGAAGACCAATAACAATAGCACATTGC AACCAACCGACAAGATTCCCAGAAACAAGTTCTGCCCATGTGGTTCAAAAAAGAAATACAAAGCTTGTTGTGGATCTGTCTTGGGAAAACAACATGCTAA GCTTGTAATGTACGCATCTGAAACTCCTTTCTTGTATAGTTGCGTGTCACGTTTCAAGTATTCACATGATGTTTCTTGGATTTTTGTTTACTGATAGAGA TTTATCTCCTATAAGAATGTAATCAAGTAATATTATGATTAGATAATTTTAATGTGGAATGATCACTACTTCTGTTTTGCTAGTAACCAAGCAGATGACT CCAGAAAGGGCAAAAAAGAGAGGAAGCAAGGAAAGAAAGGGATTTCCTCAAAAGCTGAAGCCCCATATGAATATGACTCGGTGACACTTGACGTGGGCGC ACTTTGTATTTGAATTGATTATAAACAAGTTAATTGTGTGCTCCCCCTGAGAGAGAAACTACTTTTAGGCCAATTTGCTTTTGGCACAAGGAAAATTTGG AACAGCAAAAACATAGACAAAAGAAGAAATAGTGGTTTAAAATCATTTTTAGTCTTTCTAGTTGAAGCAAGAAGATGCATTTGTGAAGAATGTGCAAGTT TTGATTAATTTTTATGTGATGTCATGAGTGAGAATCTGTGTTGCACAAAATATAAAGGTGGAATACATATTGATAGTGATTTATGATTACAAAAGAGTAG CTCAATAATCAATTACAAAGTTAAGCTAACCGATAGTCCTTTTCTTCTAACTTTTTTTGATTGATCAATGGACCTCATGAACTTGAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_36654; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123700
Blastp | OTU domain-containing protein 3 from Mus with 36.24% of identity |
---|---|
Blastx | OTU domain-containing protein 3 from Mus with 42.86% of identity |
Eggnog | OTU domain containing 3(ENOG4110S6T) |
Kegg | Link to kegg annotations (73162) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422192.1) |
Pfam | OTU-like cysteine protease (PF02338.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |