| Id Trinity | FTRINITY_DN53767_c1_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_123711 |
| Sequence | AAATTATCAACCTTGGGCTGAAGTCCAAGGCCTATTCAAAATAGTCATAAAGCCCATGGGCTCGTAACTCCTGAGCAAACGTTGGTTCTTGTTCTTCTTT TTCGTCTCTCGCTCTCGGACCCCACTTTCTAAGAACCCATTGGTTTTTTGATTTCGTAAGAGGACATGGTTAAGCGGAAGCAGCAGAAGAAGCAATCACA CAAGAAGCAAGAACAACCGCAAAATAAGAAGCAAGGAAAACAGGATGATGCTTCACAATTTTGGACTCAGTTGGATGTTCTGGGCCTACGCATTGTTGAA GTGACAGCAGATGGCAATTGTTTCTTCAGAGCCCTTGCTGATCAGTTGGAGGGCAATGAGGAGGAACATCGAAAGTACCGCAGCATGATAGTGAAACACA TATTGCTGTTTTTAACAGGACAACCGAGAAATGTTTGAGCCCTTTATTGAAGACGAAGTCCCATTCGATGAATATTGCCGATCCATGGAAACTGGTGGTA CATGGGCTGGACATATGGAATTGCAGGCAGCTTCTCTAGTAACACATAGTAATATATGCATTCACCGGAGCATGACTCCTCGCTGGTACATAAGAAATTT TGATGATCGTGGAGCTCGTATGATCCATTTGTCTTATCATGATGGGGAGCATTATAATAGCGTGCGGTTAAAGGATGATCCTTGTGACGGGCCTGCAAAG TCAATTGTAATTAAGCGACATCACATCAAGCAAAAGTTACAGCTAACAAATCCCGTGAGCGGACTGATAAAGGAACTTGTCTGCCAGGGTCCATAAAGTT GGTTATGGCTGGAAGTGGATGTGAAAACACTGAAAAAGTCGAACAGATTCTAGAGCAGGTAAATGGAAATGTTGACGCTGCAATAGAGTTTCTTATAGCA GAACAAGGAAGAGAAGAGTGCTCTGCAACATCTGATTTCTTTCCGAGTCAGGCTGATGCTGATGGACATGATGAAAATGAGAATCTCGAACACAAAGAAC ACACAGTAGAGGACAGCGTTAATGCCAAATCAAATGATAGGTCCACGAAGACCAATAACAATAGCACATTGCAACCAACCGACAAGATTCCCAGAAACAA GTTCTGCCCATGTGGTTCAAAAAAGAAATACAAAGCTTGTTGTGGATCTGTCTTGGGAAAACAACATGCTAAGCTTGTAATGTACGCATCTGAAACTCCT TTCTTGTATAGTTGCGTGTCACGTTTCAAGTATTCACATGATGTTTCTTGGATTTTTGTTTACTGATAGAGATTTATCTCCTATAAGAATGTAATCAAGT AATATTATGATTAGATAATTTTAATGTGGAATGATCACTACTTCTGTTTTGCTAGTAACCAAGCAGATGACTCCAGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36654; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123711
| Blastp | Protein translocase subunit SecA from Thiomicrospira with 40.82% of identity |
|---|---|
| Blastx | OTU domain-containing protein 3 from Mus with 40.66% of identity |
| Eggnog | Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving(COG0653) |
| Kegg | Link to kegg annotations (Tcr_0589) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422192.1) |
| Pfam | SEC-C motif (PF02810.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |