Id Trinity | FTRINITY_DN53776_c0_g4_i1 |
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Name Transcript | Ll_transcript_123389 |
Sequence | AATTACTCTATCTGTCAATTTTTTTTCTCTCTCTCTCTCTCTTTGTTCGTGGAAAATGGAATTTATGTGCAGCCATTTTATGACCTTGCCAACATATAAG CAAACATAAATACCCTTTCTTCCATGGCGATTTTGATCTTCCTCCTTCATCAAAGCCTTATAACCCTTCAGGCTTTTATGGAAGGTGGGATTTGACTTTG ATGCCACAAAGGGAAGGGTGGTGGCTGTAGAATTTACCAAAGGGCACATGTGTTTGGTTCATTACTGTTTCCATTACCATCATAACTCTTTACCTTGTAT ATGACACTTTAGCCATTTTTTTTTCAAATGGAATTGGATTTTGCCTCAGAGAACTTGAATGATTTTTCCAATTTTGTGATTCCTCTGGTAGTTGTTGTTA AAGGGTCTGAAAAAGTCTAGTTTTTTGAGACCCTTTTGAAGCTAGAAGCAGGAGGGGTTTTATAAGTGCAAGATCTTAAGAAGGCTTTGAAGTTTGAAGG ATTAGTTAGGAACAATATGAGTGCAGATACTAATTCTTGGATAAGGAGGACAAAATTCTCTCATACTGTGTGCCATAGATTGGATCCTTCGAGGTTGTCC TCTCTGCCTATTAGCATTCAACCAGGTCTGAAATCAAGGCCTTCACAGGTTCAAAGGAATTCTGTATTAAGCACACAGAGATCTATATCCCCTTTGCCTG AAACTGTTGTTTCTGAGACCTTCAAGGAAGCTCGGCATGAAAAGAAGAGGTTCTCGACGCCAGGTCCTCGAATGAATGATAATGATATGAGAATAATGGG TAAGTCGTCAAATAAGGATTCACAAGAAAGCAGGATATCAAGTGCAAATTCAACTTCCACTAGTCCAATTAGGCAAGTGAAATTGAATGACAAGTCATCG AAGCATCGCAAAGATGGATGGGCTAAGTATTTTGACAATGGTGGAAGAAGGGTTACTGCTGAGGAAACAACTGATGAATGGGCTGTTGACCTCTCTAAGC TGTTTCTTGGCCTTAGATTTGCTCATGGGGCTCATAGTCGGCTTTACCATGGTGTATATAAGGAAGAACCGGTTGCTGTGAAAATTATTAGGGTACCTGA TGATGACGAAAATGGAACCTTGGCTGCTAGATTAGAGAATCAGTTCATTAGAGAAGTCACCCTTTTATCTCGACTCCACCATCCAAATGTTATAAAGTTT GTAGGAGCATGCAGAAAGCCACCGGTCTATTTTATCATCACAGAGTATCTAGAAGAAGGTTCCTTGAGGGCATATTTGCATAAATTGGAGCGCAAAACTG TTTCTTCACAGAAGCTAATATCTTTTGCTCTGGATATTGCTCGAGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCGGAGAA TGTCCTCGTCAATGAAGACTGTCATCTTAAAATTGCTGATTTCGGCATTGCTTGTGAGGAGGCAGTCTGTGACTTAATGGCTGATGACCCTGGCACCTAC CGTTGGATGGCACCTGAGATGATCAAGCGTAAATCCTACGGGAAAAAGGTTGATATCTACAGTTTTGGACTTATGTTATGTGAGATGGTGACTGGAACAA TACCATACGAGGATATGACTCCAATCCAGGCTGCTTTTGCAGTAGTAAACAAGAATTTAAGGCCTTCTATTCCTACAAGCTGTCCACCTGCCATGAGAGC TTTAATTGAGCAATGTTGGTCCTCGCAACCGGATAAACGGCCCGAGTTCTGGCAGATTGTTAAGGTCTTAGAGCAATTCGAATCTTCACTTGTCCGGCAC GGAACCCTGACCCTGCTGCAAAACCCTTGTTCCCATGATCATAAGAAAGGACTTAGAAATTGGATTCAAAAGCTTGGCCCTGTGCATCAAAACAATGCTC CTGTTCCCAAACCCAAATTCATATGAATGAAACCTTGTTATAGTGTCCTAGCTTTTGTAGCACACCAAGTGAGCCTCTGTAATTATAAATAAAATGTTTG TTTATGAGGTTCTCTTGTTGTAGTTCACTTTTGTAACATTCATTGTGGAAAATGAATGGATTTTTCAAATTAGGGTGAAAGCTGAAAGCATCTTTATTTG CATTCTGCACTATAACTAATTATAATCAACTTTTATACCACTCTAATTGTATACCAAAAACATTAATTTATGATGGCTTCAAATAGGTAAAAGAGT BLAST |
Tissue | flowers |
Gene name | LI_gene_36720; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123389
Blastp | Serine/threonine-protein kinase HT1 from Arabidopsis with 53.18% of identity |
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Blastx | Serine/threonine-protein kinase HT1 from Arabidopsis with 53.18% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G62400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440249.1) |
Pfam | Protein tyrosine kinase (PF07714.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |