| Id Trinity | FTRINITY_DN53777_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_124180 |
| Sequence | TTTATGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTCTGCCAGGGACTTGATGTTATACAGCAAGCTCAGTCTGGAAC TGGGAAGACAGCAACTTTCTGCTCTGGGATTCTGCAGCAGCTTGACTATAGCGTTACTGAATGCCAGGCCTTGGTTTTAGCACCAACTCGTGAGCTTGCT CAGCAGATTGAGAAGGTTATGCGGGCACTTGGAGACTATTTAGGTGTGAAGGTGCATGCTTGTGTGGGAGGTACCAGTGTTCGTGAAGACCAACGTATTC TATCAAGCGGTGTTCATGTTGTTGTTGGCACTCCTGGTCGTGTGTTTGATATGCTGCGCAGGCAGTCACTTAGGCCAGATTATATCAAGATGTTTGTATT GGATGAGGCTGATGAAATGCTTTCCCGGGGTTTTAAAGATCAGATCTATGATATATTCCAGCTGCTTCCATCCAAGATTCAGGTGGGAGTTTTCTCTGCT ACCATGCCTCCAGAGGCTCTTGAGATCACAAGGAAATTTATGAACAAACCTGTGAGGATCCTTGTGAAGCGTGACGAGCTTACCCTGGAAGGTATTAAGC AGTTTCATGTCAATGTCGAGAAAGAGGAGTGGAAGCTGGACACACTCTGTGATCTTTATGAGACATTGGCGATCACTCAGAGTGTCATTTTTGTGAACAC CAGAAGGAAGGTTGATTGGCTTACTGACAAGATGCGAAGCCGAGATCACACAGTCTCAGCAACCCATGGAGACATGGACCAGAATACCCGTGACATTATC ATGCGTGAATTCCGTTCTGGGTCTTCCCGTGTTTTAATAACTACTGATCTTTTGGCTCGTGGTATCGATGTCCAGCAAGTGTCTCTAGTTATAAACTATG ATCTCCCAACACAGCCGGAGAACTATCTCCATCGTATTGGTCGTAGTGGAAGGTTTGGTAGGAAGGGTGTTGCCATCAACTTTGTCACACAGGATGATGA AAGAATGCTTTATGACATCCAGAAGTTTTATAATGTGGTAATTGAGGAGCTGCCATCAAATGTTGCTGAACTCCTCTGAAGAATTTTGTGTCCATCCCCA TCAAATTAGAGGAATGGCGGTTCAAGGTAAGTTTTTATGTAATGTTTCTTTTCCTATCTCCCTTTTGTTGTATTTCTGCCTTTTAAACCTTATTTGGACT TTTTATAGGTTTAGTAATTTAATTTAAATCCAGTCAGTTGAATGTCCAAAATTGACAATTACTTGCAATGTGGAATCTCATTATTTTGCCCAAATTGGTT TATTTATTGTCTTTGTTGCACTTATCTACCAACAAGTGTTTTTAATGTTTTAATTATTCTAACATAACATAACATACATTGTGGTAGTATGTTATTGGAG TGGAATGCAATTGTTTGTAATCACCAGATAATAACTTATTTTTTGGGTATGTTGAAATTGGAAGATTTTTATTATAATCACCATGTTGCCTCATTGATGT GAAAAGTGTTGATTAGTAGTTTAGTACCAATAAAAAGTTGAAGTGTTGGTACTTGGTAATGGTTATTCATGTTGCCATCTTTTTAATGCTACATTTAAGA GACCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36728; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_124180
| Blastp | Eukaryotic initiation factor 4A-1 from Oryza sativa with 96.93% of identity |
|---|---|
| Blastx | Eukaryotic initiation factor 4A-1 from Oryza sativa with 96.93% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (4341966) |
| CantataDB | - |
| Mirbase | lja-MIR7534 (MI0024418) |
| Ncbi protein | Link to NCBI protein (XP_019437557.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |