Ll_transcript_121793

• Id Trinity: FTRINITY_DN53779_c6_g2_i2
• Name Transcript: Ll_transcript_121793
• Sequence: AAACCATTCCCGAGACAATGAGGTAGACGATGTGGGACTTACTCTCCAACATTCTCGGGTTCGATCCTTGTTGATAGAAAAAATGTCCGCTCGCTCGGAG AGAATATGGGAAAAAGAGAAAAAGGGTTTCCAAACCTTTGTTATCCCCTTCTAGCTTCTTGGCTTAGCACCTTGATACTGTGGTTACTACCAATGGGAGA AGAAAAAGTAAATGTTTGCAACAACAAATTCAAACACTTTCAAGAACCCATTTTGATTTCAAATACTGAATCTTCTTCTCAACCCTTTCTCTCATTCTCT CACTTTCCCTTTTCTATATAACCCACTCTTCACAAAAACCCTCTTTTTTTGCCTTCAATTACTTTATTACCCTTTTCTTCTTTCAATGGCTTCTACCCCT TCACCCCAATGTTCTTCTCTCCCTTCTAGGCCTGAAAACACCACCAGCCACCGTCATCACCACCATAACACCACCACCACCACCACCACCAACCACCACA ACAGCAACAGCAACAGAAACAACAACCTTAGACACTGTAATAACAGAAACAACAACCTCAGACACCATAACAGTTATAACAATAACCGTTTTTCTTCTTA TAACAGGTATTCATCCAATGCTTCTAATGGGAATGGAGCAAATTATGGGTCTGGTTCAGGTGTTGGTGGTGGTGGTGGTGGTGGTGCTGTGTCTGCTGCT GCTGCAGCTGCTACTGGTGGTGCTATCGGGTTTTCGAGCTCGTTTATTGGTGGTGTTAGGAAGACTGGACTTGGGCATGAGTTCTCTGGGAGGCGGTCTA CTCGGTTTGTGTCAAAGATGTATTCTGTTCAGACTAGGGCGAGCTCGAATAAGAACTACCATTCGGCTGTCGCTGACGAGGCGCTACGATGTTTGGTTAA AGCTGGTAATGATTGCTCTGCTATTGATAATGTGCTGCTTAGTTTCGAGAATAGGCTTGTTCGGGTCGAGGATTATATTTATTTGCTTAAGGAGTTTGTG AATGAGGGTACTTACTTGTTAGCGAATAAGTGTTATGATTTTGCTATGGGGATATGGAATGGTTGTGGTACAAGGCTTGAGAGGGGGAAGTTGACTAGTA CTATGATTGGTACACTTGGGAGGATGAGAAAGGTTGATGATGCTAGGAGGCTTTTTGAGTTTGCTAAGAATGAAGGGTATGGAAACACCGTTTACTCGTA TTCGTCGATGATTAGTGCGTTGGGGCGTAATGGGCGGTTTCATGAGGCTGTGAGTTTGTTCTGGGCCATGAGAAACTCTGGGATGGAGCCGACCTTGATT ACTTATAATTCGTTGATCGATGCAGGCGCAAAAGCGCAAGTGGAGTTCAGCAAAGTTGTGAAGTTTTTTGATGAATTGGTTACCAAGGGCATAAAACCCG ATCGGCTTACTTATAACTCACTTCTTTCAGTTTGTGTCCCAAGAGGTTTGTGGGAAGTGGCTCAAAATTTGTTAGCTGAAATGGAGCAAAGAGGTATCGA CCGGGATGTCTATACTTATAATACATATTTGGACACATTGTGTAAAGGTGGGCAGATGGATTTGGCCGGGAAAGTTATGACAGAAGAGATGCCCGCTAGG AAAATTTATCCGAATGTAGTGACTTATAGTACTATGATGGATGGATATGCAAAGGCGGGAAGGCTTGAAGATGCGTTGTATTTGTACAATGAAATGAAGC GTCTGTCGATTCGCTTTGATAGAGTGTCTTACAATACACTTGTTGCAGTTTTTGCAAAGCTTGGTCTGTTTGAGGAGGTAAGGAACATCATCAAAGACAT GGAGAGTTGTGGGCTAACGAAGGACGTTGTGACATATAATGCACTTTTAGGTGGCTACGGGAAGCATAGCATGTATGATGAAGTTAGGAGACTATTTGAA GAGATGAAAGCAAAAAATATACATCCAAATATGTTAACTTATTCAACAATGATTGATGTGTACACCAAAGGTTGTATGTATATGGAGGCAATGGATGTGT ATAAAGAATTCAAGAAGGAAGGGTTAGAAGCAGATGTTGTGTTTTATAGCTCACTAATTGATGTGCTATGCAAAAATGGTTTAGTAGAATGTGCTATGAT GTTGCTTGAAATGATGACGGAGGATGGAATTAGGCCCAATGTTGTCACTTACAACTCCATAATTGATGCATTCGGTCAAGTTATGGGATTGGAATGGAGA TCTGATACTTCTTTTGAAGCCGATGAGCATCAAAGTACACGTAATTCTTCTCAACTTGTGGATACTTTTCAAAGCCAGGTTGGAGATAAGGAGGATGACC GAGTCCTGAAGATGTTTGAGCAACTTGCAGTGGATAAATCCGGTCATACGAACAAGGATCTGAGGAACAGACAAGACAAATTCAACATATTGTGGATCCT TAACAAAATGCATGAACTGAAAATTAAACCAAATGTTGTAACATTTTCTGCCATTTTGAATGCTTGCAGCCGTTGCAATTCATTTGGAGATGCTTCGAAA TTGTTGGATGAGCTCTGCTTGTTTGATAACCAGGTCTATGGTGTAGCCCATGGACTACTTCTGGGTTACCGGGAAAACATATGGTTTAAAGCTCAATCTT TGTTCGATGAAATCAAACACATGGATTCTTCAACAGCATCTGCCTTTTATAATGCCCTTACTGATATGTTATGGCATTTTGGTCAGAAACGAGGCGCCCA GCTGGTTGTTCTTGAAGGAAGACGTCGGAATGTATGGAAGGGTGACTGGTCCGAATCTTGCCTGGACCTGCATCTGATGTCTTGTGGAGCTGCTTGTGCA ATGGTGCATGCATGGTTGCTCAATATACGCACCGTCGTTTTTGAAGGCAGTGAACTGCCAAAACTATTGAGTATTTTAACTGGATGGGGCAAGCATAGCA AAGTCGTCGGCGACGGTGCTTTAAGAAGGGCTGTTGAGGCACTCCTGAATCGCATCGGAGCACCGTTTCGGAATGCTGAATGTAACATAGGGAGGTTTAT ATCACCAGGATATGTTGTTGCTGCATGGTTGAAACAATCCAGCACTCTGAATGTGCTTGTTCTGCATGATGACATAAGTGATTCTAGGCCTGTTGGTCAA GTGTATAACTTGCAAGCTCTGTGCATGTAGTTACAACTATCATGTTTAATACCCTAGCCAGTGATGGCTCTAGTAAGTGTTACATGGGCAAAATAGTACT GAATACATTATTTATATTTGACTCTATCTTTCCTTAATTTTACTTTCCTCAATTCAATGAATGTATTGGCAATGGACTCTTCTGAAGTTTTCCATATCAA AAAGTTAACAAATAGTGTGAAGTAATGTTCCTTTCCTCTATGAAAAGCCTGTTACATCTGTGGCATATTTTTCATTAAAAAGGCGACAGAATGTACGAGA CTCCCACCTGACACCTAGTGGTGGAGTTTGAAGATGTTTGATATATGCAACCTTATCCCCA
• Tissue: flowers
• Gene name: LI_gene_36764;
• Additional information: details;

Expression of Ll_transcript_121793

FPKM

• FPAB: 9.1
• FPNAB: 20.1
• LF1: 21.6
• LF2: 20.7
• LF3: 18.9
• LF4: 18.7
• UF1: 22.4
• UF2: 21.4
• UF3: 19
• UF4: 17.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_121793

• Blastp: Pentatricopeptide repeat-containing protein At2g31400, chloroplastic from Arabidopsis with 54.03% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g31400, chloroplastic from Arabidopsis with 56.11% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G31400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452137.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;