| Id Trinity | FTRINITY_DN53794_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_123929 |
| Sequence | GGAAAGAGTATCCTTTGCTTCAATTGTTTTTTGTTTTTTAGTTTCTTGATTTTTATTTGACTTTATGTTTTTTAGAGTTATGATTTGCCTAAGGGAACAA TGATAGTGTGGGGTTTAGGTTATTAGCATATTTTTGTGTTGAAAGCAATTAAACAACTCAATGTCACAATGTTACTCAATGAGGGAGGGAACTATTTTAA ATTTTTAAAAATTAAGTAAATCTAAACATACGTTCTAAACAATGTCGCTCGGTCGAGTCTTATGAATGGAAAAAATAGGTGTTTGGAGAGCTTTGACCTC TTAAGGGTCTGCTTGCGAGTCGATTATTGTAGGGCAATGGAGGGAAGGGAAATGCTTCAGGTGGCTCTCAAACCCCCTCTTTCCTTTCCTTTCCCTGTAA AACCTAATGCAAACAAACCCGTAAGTTCCAGTGACATTAGTCGGAGTGTGAAGTGATTTCTGGATATCGTGGGGCTTAGGCCTAAAAAGATATTCAACCA TGCATTTGTGAAGGCGTAACTACTCTGCTCGACCATTTCGTAGAAATTTCATTTTCCTTAAAGACAATACTATAACAACTGTCCTGCCTAATATTTATTT CCCACAGCAACATGTTGTTTATGGCACATCAATAAATGCCAAAGTTTATCGTTTTGTTATCGTCTTTAACTTGTATTAGATACGTGGAAGCAAAAGCGAA AGGGATTGATAATTATGATAGGGAATTGGAGGACGTTATAGATAGGCTCATCGCCGAGTGCGAAAGGAAAATTGGCAGAGCTCTGAAGCGCCTCGAGGAT GACGATGCCAAAGCTGCAATCGCAATATCAGTGACTGAAGTTACTCAGACGCCTGAGGTGCTTGAGTTGTCAAAGGAAATCAAGGAGAAGTTGAAAGAAG CTGATCAATATGGTAATACTATCACTCATGTTAGTTAGAATCGTATAATACATATTCGATGCGGTTTTCATACAAAACAGTGCTTATTGAGTGGTCCATT GTTTTCTGCTCCTGAATTGTGGACGGAATCTCACTGAAACGTAGCTGGAATTATGTATCGCACGATTCTAGCTGTCACGGGTTGCCTACCGGTTTGAGTG GGTCACACATGACCCTGTTTCTAAAACCCTAAAATTAACACTTTTTAAATGCCACTAATGGGCCGTTTTACCTTGTCTATTTAGCCCAAATTCATTTTCA AGCCCCCAATCTGAATAAAAAGCGCGAATAGCTGCAAAACCTAGCATTTTGTGTAACAGTGGCTGGCAGTGAAAAGTGAAAATGTGAACAGTCGGGGGAA AACGTTTCTACACGGAACAGTGCCGGTGCCTTTCCCTCTGCATCCTTTTCCATTTCTTCTCTATGCGGAACAGTGCAACCGTGCATGTTATTTTGCTATC CTTTGGTGTTAATTTTCTATTTTGATTATACACTTATGACTTGGAACTTGTGGATATTAAGTCATAATAATTACATTTAACTTGCTATCTTATTTCCTAT TATGACTTATGGATTATGAATTTATGATACGTATGACCCTTATGGCTTATGTTATGATTTTTTTTTATTATGTTTATTTATTGACCATGGATCTGACAAT TGACAATACAATTCATGATTCGGAAAATAGTTCTAATGGTTAAAGTACAATTCATGATACTAATTACCATGCTATCACTAAGTAAACTTTTTTGGCTTTT AGATGATGTTCCATTTTTGTTCCTAAGCTTGAAGAAAAGAACATGGAAGGGGATTATACATGACATGGATCTGTTATTGGTGTTTGTTTTATTTGATATT ATCCCATAATTATCCCTTTCTCAAATTGTAGCATTTGCATATAGGTTGAATGCGCATGTTGGACTGAATGTCACATGAATGGCTACTGTTGTTTTTCTGC CACTGGTTCCTTGATAACCTATTTTTCTAGACTTCTAGTCCAAGTTTCAGATTGCAAGAACTTAGAGTATGTAAAATTGTTTACCGAGTTTCAACATGAT TAGACGAGATTTAATATTATTTGATATTTGATTGGAGAGCTTGATTTCACACCCAAAAGTTATTACGAAAATATAAAAAATTCCAGTTAAGATATTTCAT CAGTTTTTACCTTCCATCATTTAGCTGATGTGAGCAGGGTTTTGGTTTGTTAAATCATGTGGAAAGAAATCAAGCTATCGAAGTATTTAAACTTGCTTGC ATTACAATTGTGTGAATTTTTTTATCCTGATATACATGAATTCATACGTGATATTATACCCTTTTTGAAGTTTTTTGACGCATTTATTTATTTCACTTGT GTATAATAATATTGGATTTTCAGATCTTGAAGGCAACACAGATCTCAAGATCCGAGCTATGGAAATTGTAGAGGAACTTAGGACTAAGAGAGCTGACAAT CAGGCTACACTTCTTCTTGATGCCTTCAACAAAGATAGAGCATCTTTACCTCAACCTCTTCCAAATCCACCGCCATTGGCACCCTTTCCTGTAGTTCCCC GTGATGCTCGAACACAGGAGATGATAAATGAAAAGTTCAAGAAGGCTGAAGAACTTGGTGAACAAGGAATGGTTGATGAGGCACAAAAAGCATTGGAAGA GGCTGAAGCACTTAAGAAGCTCCCTCCAAGGCAGGAGCCACCATTGGATCCTTCTAAGTACACAGCTGCAGATGTTCGCATTACTGATCAGAAGCTACGT GTGTGTGACATTTGTGGGGCATTTTTGAGTGTTTATGACAGTGATCGCCGCTTAGCTGACCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAGATTC GTGAGAAGTTAGCAGAACTTCAAGAAGAAAGGAACCAGAGCCGAAAGATCGATCGGCAGGATGATAAGAAATCAAAAGAACTGAGTAGGGATCGTGACAG GGAGTCAAGTAAGGACCGTGAAGGTGGCGAGACTCGTGAACGAGGCAGAGACTATGATCACAGGAGCAGGGATCGTGATAGGCATAATGGTAGAGACCGT GGTTATGATCGAGATCGTGATAGGGACTCTGATCGCTCCCGACACTATGACTCAAGAAGTCGCCGAAGGTCCCGTTCACGATCTCAAGAGCGCTCTAGAG ACTATGATCGCCATAGGCGTCATGATCGATACTAGTCATTGCTCTGGATTTTATGGACATGATGAGATATTTGATGCAGGTGGGTGATGAACCTCATGTC GGACCAATAATTTTGCTATTTCATGTGTTGAACTGTTTCTCCAATGATAGATTTAACTTGAGCTTTGGTGTTGCTAAATTGTGTTTCATCTTGCTTTGAA GT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36918; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123929
| Blastp | Putative RNA-binding protein Luc7-like 1 from Mus with 48.25% of identity |
|---|---|
| Blastx | Putative RNA-binding protein Luc7-like 1 from Mus with 49.12% of identity |
| Eggnog | S. cerevisiae(COG5200) |
| Kegg | Link to kegg annotations (66978) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449852.1) |
| Pfam | LUC7 N_terminus (PF03194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |