| Id Trinity | FTRINITY_DN53794_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_123932 |
| Sequence | ATTCTTTTGAGCTACCTTTTCAAAAATAAATATCTTAGATCGCGAGGGCACTCGCGCGGAGGAGTAAGAAACCCCAAAAGAGTGAAGCAGAGTGAGAGAA TCGAGAACCCTAATCATATCATCATAACTTGTGAGCCAAATCAACATTTTGTCTAGTTTTGATTTAGCTAACTAACAACAATGGATGCTATAAGGAAGCA ACTCGACGTGTTAATGGGCGCAAATCGCAATGGCGATGTTCGAGAAGTTAATCGCAAATACTACGATCGCGATGTTTGTCGCCTTTACCTCGTTGGTCTT TGTCCTCACGAACTCTTTCAACTCACTAAAATGGATATGGGTTCATGCCCTAACGTGCATTCGTTGCAGCTCAGGAAAGAATACGAGGAAGCAAAATCAA AAGGGATTGATAATTATGACAGGGAGTTAGAGGATGTTATAGATAAGCTCATTGGCGAGTGCGATAGGAAAATTGGCAGAGCGTTGAAGCGCCTTGAGGA GGATGATGCCAAAGCTGCAATTGCAATTTCAGTGACTGAAGTTACTCAGACACCCGAGGTGCTTGAGTTGTCAAGGGAAATCAAAGAAAAGCTGAAAGAA GCTGATCAATATGATCTTGAAGGCAAGATGGATCTCAAGATCCGAGCTATGGAAATTGTAGACGAACTTAGGACTAAGAGAGCCGACAAGCAGTCTACGC TTCTTTTAGATGCCTTCAACAAAGATAGAGCATCTTTACCTCAACCTCTGCCAAATCCACCGTCATTGGCAGCCATTCCCTTGGTTGCTCCCGATCCTCA AACTCAGGAGTTGATAAATGAAAAGTTGAAGAAGGCTGAAGATCTTGGTGAACAAGGAATGGTTGATGAGGCACAGAAGGCATTGGAAGAGGCTGAAGCA CTTAAGAAGCTTCCTCCAAGGCAGGAGCCACTATTGGATTCTTCCAAGTATACAGCTGCAGATGTTCGGATTACTGATCAGAAGCTACGTGTGTGTGACA TTTGTGGGGCATTTTTGAGTGTTTATGACAGGCTGTTGTGCCAGTTTTACGAGGATAACTTTTGCAGCTAAAGAATTGATCGCCGCTTAGCTGACCATTT TGGAGGGAAACTTCATTTAGGGTATATGCAGATTCGTGAGAAGTTAGCAGAACTTCAAGTAAGACATCACACCATTCATCATTCTTGTGTAAACTGTATT CTATTCTATAACTGGTTTCGAAATATGTATTTCACCTTTGATAATGAGAAAATGTCAGGATTTCACTGTCAGATGTTTGCAACATGTCTCCCTAAAGCTT CTGTGTTGATCATCTTCCTTGCTATTGCTTCCATCTTATTCTTGAAATATATATAGTCATGTCATTCCTCTTTCATGCATTGTATAGAAAAGAAAAAAAT GAATACTGTTGAGCCTATTGAGTTATCCTTTAAACTCATCTTTTAAATGCCCTCCATAATCTGGGTATGTTGGTTCAGTTACTGGTGTTTGCTTCACTTA GTTCTAAACAGATTCCCAATTAGTACATGATGCAAGTTCTCTAATCTTAAAGGAAAATGGTTTTTATATCTCTTGGTGTTAATCATCCTTTTCTAATTAG TATTAACTAAACTTTCAATTAGGTCCTCCTGAAAGCACACATACTTGTGAATAGATGCACTTGTTATTTTGATGTGTGATCTAGCATTGTATGATGTTGC ACTTCTTAGGTTAATCAAGTATTTTATCATTACCTTCATAATATAAAGAAAATGGAAATATGTTTCAGATTGATGTCTCTGGTTTCCAGTCAAGTGATTT ATGTTTTTGTCCATCACTGATGATCCTACCTATCATTGCAAGTTTGTCACTTTGTGCACCCAGTTATTTGCCATGCATAGTGTTATGGGAGACGTACATT GGAGTAATTGTTCGTCAATTTTGGTTTGTTTTGTTTGTTCAATATTGAAAAAGATTCTTTTTTTCCTCTAGTATTAAACCTACAAGTGTTATTTCTGATT TTTTCAAAGTGTCTTGCCATCCATAGGCAAATGAAGAATCAAAAGAAACAAAAATGGCGAGGTTGACTTTGTATGGCTGGGGGTTTGTGTTTTTGGGCAT GCCTTTATTTTATTGTGGATTTTATTTATCCAAAATTATATTAACTTTTGGTTTATTGGGGAGAGGATCTCATACTGTGTTATTTTCTGATTCAGGAAGA AAGGAACCAGAGCCGAAAGATCGATCGGCAGGATGATAAGAAGTAAATTTCGTTGCTTTATAATATAGAAACATACATATTTGATGGACATTCAAATATA ATTTCGTTACTCGTTAATATTTGTTGCATTTGTTGGCCAGATCAAAAGAACTGAGTAGGGATCGTGACAGGGAGTCAAGTAAGGACCGTGAAGGTGGCGA GACTCGTGAACGAGGCAGAGACTATGATCACAGGAGCAGGGATCGTGATAGGCATAATGGTAGAGACCGTGGTTATGATCGAGATCGTGATAGGGACTCT GATCGCTCCCGACACTATGACTCAAGAAGTCGCCGAAGGTCCCGTTCACGATCTCAAGAGCGCTCTAGAGACTATGATCGCCATAGGTACATTCTCCCAT GGCTATTTCTTAATTATGTATATCTTTTTTCGCAACATCCCTCTGTTAACCACGGAGAAATTGATTAGGAGACACAAGTGGGTCCACCATCTAATAACTA GCAGGACTTTGCTACATTGTCACTCGTAAAGCTCTTGTCATGTCCAAATACAAGAGAATGTGTATAATTTTTCTGGCTTGAGAGCTTCTGGTTTAATCTT CTGCTGATTCATTCTCTCTTTATTACATTATTATCTTATTGAATTTAATTTTGATATATTGTTAGTTTAAGAAAGTTTTATACAATATTATCCAATGGTG TGCTGCTACATTAGTTTAAGAAAACTTTAATCACATGTCAAACTCATATTATGGGATTGGTTCCAAATATCTAACCAGTGTTCTCTTTTGCCAGGCGTCA TGATCGATACTAGTCATTGCTCTGGATTTTATGGACATGATGAGATATTTGATGCAGGTGGGTGATGAACCTCATGTCGGACCAATAATTTTGCTATTTC ATGTGTTGAACTGTTTCTCCAATGATAGATTTAACTTGAGCTTTGGTGTTGCTAAATTGTGTTTCATCTTGCTTTGAAGTTACTCAATTCAACTTGTGAT CTGGGTCATTGATCAGTTGTTCCTGCGTTTGTGCTTTAAAAATACTCGTGTTAATTTATTACCATTGTAACGTGTTATAGAGAATTGTGTGCAAGGATGC TGGTGGTAATTGATATGGGTGGTGTTTAAGACTTGTTCCATTTTATGAATTTGTTATAACTGGAATTTTATTACGATAAACTTGATTATAGAAATTAGTT TTCACGTTCTGCAGTTGATTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36918; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_123932
| Blastp | Putative RNA-binding protein Luc7-like 2 from Homo with 33.54% of identity |
|---|---|
| Blastx | Putative RNA-binding protein Luc7-like 2 from Homo with 32.35% of identity |
| Eggnog | S. cerevisiae(COG5200) |
| Kegg | Link to kegg annotations (51631) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434236.1) |
| Pfam | LUC7 N_terminus (PF03194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |