Id Trinity | FTRINITY_DN53799_c1_g3_i3 |
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Name Transcript | Ll_transcript_124441 |
Sequence | TGATAAATGATAGATATGATTGTTTAAGCACCTTGGGGATAGAGATGCTGACTCACTCTTGTCTTGTTTTGTTTTGTTTTGTTTACTGTTTTTCAATCTT CATCAACTGCACCAAACATAACACATAACAAGACCAACCACCTTAACTTTAAGGTACAACTTTGAGATACCCAAAATTTCCAAATCCAAGACTCACATAT CAGTAATCATGTCATCAAATTGTGTTAAGAGATTTGGAGGAAGATGGGTTTCTTTAGTTTCACACAGAGGCTTTTCTACATCTTCTGAGCAAGGTCTTAA GTCACTGAACCTTTTTTCTGCTATTAACCAAGCTCTTCACATTGCCCTTGACACAGATCCACGTGCTTATGTATTTGGAGAGGATGTAAGCTTTGGCGGA GTTTTCCGTTGCACGACAGGATTAGCCGATCGATTTGGTAAAAGTAGGGTTTTCAATACTCCTCTTTGTGAACAGGGTATCGTTGGCTTCGGCATTGGTC TAGCAGCAATGGGCAATAGAGCAATAGCAGAAATCCAGTTTGCGGATTACATTTATCCGGCTTTTGATCAGATTGTCAATGAAGCTGCAAAATTCAGATA CCGGAGCGGGAACCAATTTAATTGTGGTGGTTTAACAATCAGAGCCCCTTATGGAGCTGTTGGCCATGGTGGGCATTACCACTCGCAATCGCCCGAGGCT TTCTTCTGCCATGTTCCCGGTATTAAAGTAGTTATTCCTCGAAGTCCGCGGCAAGCGAAAGGGTTATTACTATCTTGCATAAGAGATCCAAATCCTGTTG TATTTTTTGAACCAAAGTGGCTTTACCGTTTGGCCGTTGAAGAAGTACCCGAGGATGAATATATGTTACCTTTATCCGAGGCCGAGGTGGTTCGGCAGGG TTCGGATATTACGCTGGTTGGGTGGGGAGCTCAATTAGCAATAATGGAACAAGCTTGTCTTGATGCTGAGAAAGTAAGACTCTTCTTTTTACACTGAGAA CATGGATGCTGCATTATTCACCCAATGTCTGATTTGATAGTGTAACTACATACTTATTTTATTTGGTTTCCCGCGAATTCCCACCGGAGGGTAGAACTAA TCCCTCGAGCATAGCCAGGCTTGTCCTTCCCACTAGTACTTTCTCCCGGTATTGAACCATGGTTCTCTCATGCGGCCGTAGTGCGCCTCTACCACGTGTA ACTACATGCTCACACCTCTCTTATTTTTCTAATCAATTCATACACTATTACACCACTTAATGAATTAATCATAATTCTGATATATACTTCAGAACAGAGT CCTAATATATCTGTCATAGTATATACTTATCTATGTTGGAATTGTAATGTTAATGTGAGATTCTGCAGGAGGGAATTTCTTGTGAACTGATAGATCTGAA GACACTAATACCTTGGGATAAAGAAACAGTGGAAGCCTCAGTTAAGAAAACTGGAAGATTGCTTATTAGTCATGAAGCTCCTGTAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_36966; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_124441
Blastp | 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 89.12% of identity |
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Blastx | 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 89.12% of identity |
Eggnog | Dehydrogenase, E1 component(COG0022) |
Kegg | Link to kegg annotations (AT1G55510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448466.1) |
Pfam | Transketolase, pyrimidine binding domain (PF02779.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |