Ll_transcript_24821

• Id Trinity: FTRINITY_DN53812_c2_g1_i2
• Name Transcript: Ll_transcript_24821
• Sequence: CACTGTTCTTATCTCTCTTCAGTTGCTACTACTATAATGCAAGTTGTGTCTTCCACATCGTGTTTTCTGAAACTAGGTGTAAAAGCTTCATGGGACACAC AACAAAGACCCTCTTACAACCCAAATGCTCCAAGAAAAGAGCTTAATAAGAAGCTTACAAAAACACAATCCATTCCTTCTCCTCCTCCTTTGATTTCTAC CAAGAAAGAACAATACATTTCTGATCTTTTGAAACGCAACACTGCTCCAAATTCTTCAACTATAAATGGAAAAGAAAAACAAAAACAAGAAGAAGAAGAA GAAGATGATGATGGTGGTGATAATGGAGTATATTTGGGATATGAAAGATGGTTGCCAACTCCACCTAAAGTTGTTAAGCCTCGTTCTGTGTTTAATGCTG CAACTTTAGCTTATATTGGTGACTGCATCTATGAGCTATATGCCCGTCGACACTTTTTATTCCCTCCCCTAGGTATCGAAGAATACAATGTTCGTGTAAC GGCGGTTGTGCGTTGTGAAGCTCAAGTATGACTTCTTCCCTTGTTTCTTTATTTTAACGTCATGTGAAGCAATGAAATTAGATAAATAGCATGCTAGTTC TTGACTGTGCTGGTAAATATTTAATTTTCGGTATGTTTTCCCCCCTTCCCAACTGAAGAAGTAGAAAGAAACCCTTTATTGCCTTTAGTCAGATTCAGTT AAGTCTATATTTTCTTTTTCTCAACTTTGGCACTGTTCATGTTTTCTCCATCCCAAATCTATTCATATAGCTTTACATGCTTATGAGATCTGTTTCACAT GATATTAATCAGTATCTATTTCTCACTAGTGGAAAAAGATGTAATTCGAGATGGAAAAGGGAGAAATTCACTAAGGGTCCATTTGGATGTTGGAATCGGA AATAAATCGTAGAGTTTGATTTCAATTTTATCAAAATTTGAACTGGATATGAATTTTGATTTTAATGTTTGGGGCAAATAAAGAATTGAGGTATATGGTT GTAATCGATTTGGAGGATGTCGTCGATGGTGGTGGTAGGAGGGGTATCATTGATGATGGTAATTATTGAACACTGCTAGCGGTGGTAGTCCGAGAGTGTC GTCAGCAACTATCATCAGTGGACACTGTTAGTGACCATGGTCAATGGTTGCTGTCAGTTATTGAAAGACACTGCAACAAAATGGTTGGTGGACAACATCG ACGATGGTGATTCAAGGGATTCCTTGGTGACGATGCTTACAGTATGCCACTGGCAATGATGGTCAGTGTATGGTAATTCGGCGATGGTGGTTTGTGGACG TCATGAGTGATGGTGGCAGGATGCTGTTGCAAGTAACAATGGTCATATGGCATCCCAATGACCACCAACTCGGCCGACATCAACAGCAATTGTTATTGAA GTATGCAACAAAGATAATAAATAATATTTATAACTTACATATTTTCCATTTTCATGATATTGGAATTTGGAATCTGGAATTCTAATTCTAATTTTTATTC GCCTAATTCCATGCGCCTAACGTCACATAAGTGTATTACTGTATTTCATGTTGAGTTTTAATAACAATAATATGCTTAGTTCTTTTCCCTCTTGTATGCA AACTTTAGAAGCTTTTCCCCAGGAATGAATTTGTTGAGAGGGTTTTTTCATAGTTTGAATCCCATATTCTTGCTATTAATTGTGACCATCTTTATATCTT CGCTATTAACTATTGTTCTACTTTTCTTCCGATTCCTAAAGTAAAACGATATGAATTTTGGTTTCAGTTTGTGATGTCCTGTTGATTTTGTTTATTCATG TTTTCTGTGTTCCAGGATGCATTGCTCCTGAAACTTCTCAACAGTGACTTCTTATCAGATCAAGAGAAAGATGTTCTTAGATGGGGAAAGAACATTGATT CAACAAGCAAAACTAAGACAAAAAAGCGTGCAGGTTCTGCTGTATATAGCAGAGCATCCTCACTAGAAACATTAGTTGGCTACCTCTATATGACAAATGT GATTCGCTTGGAAAAGCTAATGTCAGAGTTGGGATTCTCAGTCGATTCTTCAATAGCTTTGAATGTGGAAGAAGTTGTAGCAAGCGAGTTGAACGACGGG AAAAGATGATCATCAGACAGTCTTTCACTGAAGCAGACAGAACAACATAATGAAGATTTAGTTCAATCCATTGCGTTCTTCAGCGAAACTTAACCAAGTC TCGGTTTCTATTTTGCTTATTGGTCGGCGATTCTGTACCAGTACCAATTCCAACCACATAATTTGACATGCTATTGATCAGAAGAAGCCTTTTAGGTCCT GTCCTAACATAAATTTCTGTTGTACAAATTTTGTGGTTCCATAGTTTGTTAGTAATTTGTCACATCTTGTTTTTAGAGGAGTACTCAATCAGAAGAAGAT AATGTAGTGAAACTTGGGTTATATGGGGTTGATTTGTGTAAGGTTTTTTTTTCAGTTTTGCTTGAGAATTTGGTCCAGTGAGGCAGTGACTGGTTCAGGT GGGAATTAAGTATATAAGGACCATTATCTCTATCTGAAATAGTTCTATGAAGTTATTGTTTAGTTAAAAATTTCATTTTAATTAAGTCTCATAATTTGTA ATTATGCATGTTACTAAAGTGGATGTGATAAGCCAATAAGTCAGTCCAATTATCAGGATTTTAGGCCTGATTTTGATTTGCCAATAAGAGGTGTTTTGAT TCCAAAAGTGCTTAAATGTTGAAACTAAAAACATGTCACTGGG
• Tissue: flowers
• Gene name: LI_gene_37072;
• Additional information: details;

Expression of Ll_transcript_24821

FPKM

• FPAB: 0
• FPNAB: 0.2
• LF1: 0.3
• LF2: 0.2
• LF3: 0.1
• LF4: 0.2
• UF1: 0
• UF2: 0.3
• UF3: 0.2
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_24821

• Blastp: Mini-ribonuclease 3 from Thermosynechococcus with 41.54% of identity
• Blastx: Mini-ribonuclease 3 from Synechocystis with 43.1% of identity
• Eggnog: Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)(COG1939)
• Kegg: Link to kegg annotations (tlr0428)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447387.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;