| Id Trinity | FTRINITY_DN53812_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_24823 |
| Sequence | CACTGTTCTTATCTCTCTTCAGTTGCTACTACTATAATGCAAGTTGTGTCTTCCACATCGTGTTTTCTGAAACTAGGTGTAAAAGCTTCATGGGACACAC AACAAAGACCCTCTTACAACCCAAATGCTCCAAGAAAAGAGCTTAATAAGAAGCTTACAAAAACACAATCCATTCCTTCTCCTCCTCCTTTGATTTCTAC CAAGAAAGAACAATACATTTCTGATCTTTTGAAACGCAACACTGCTCCAAATTCTTCAACTATAAATGGAAAAGAAAAACAAAAACAAGAAGAAGAAGAA GAAGATGATGATGGTGGTGATAATGGAGTATATTTGGGATATGAAAGATGGTTGCCAACTCCACCTAAAGTTGTTAAGCCTCGTTCTGTGTTTAATGCTG CAACTTTAGCTTATATTGGTGACTGCATCTATGAGCTATATGCCCGTCGACACTTTTTATTCCCTCCCCTAGGTATCGAAGAATACAATGTTCGTGTAAC GGCGGTTGTGCGTTGTGAAGCTCAAGTATGACTTCTTCCCTTGTTTCTTTATTTTAACGTCATGTGAAGCAATGAAATTAGATAAATAGCATGCTAGTTC TTGACTGTGCTGGTAAATATTTAATTTTCGGTATGTTTTCCCCCCTTCCCAACTGAAGAAGTAGAAAGAAACCCTTTATTGCCTTTAGTCAGATTCAGTT AAGTCTATATTTTCTTTTTCTCAACTTTGGCACTGTTCATGTTTTCTCCATCCCAAATCTATTCATATAGCTTTACATGCTTATGAGATCTGTTTCACAT GATATTAATCAGTATCTATTTCTCACTAGTGGAAAAAGATGTAATTCGAGATGGAAAAGGGAGAAATTCACTAAGGGTCCATTTGGATGTTGGAATCGGA AATAAATCGTAGAGTTTGATTTCAATTTTATCAAAATTTGAACTGGATATGAATTTTGATTTTAATGTTTGGGGCAAATAAAGAATTGAGGTATATGGTT GTAATCGATTTGGAGGATGTCGTCGATGGTGGTGGTAGGAGGGGTATCATTGATGATGGTAATTATTGAACACTGCTAGCGGTGGTAGTCCGAGAGTGTC GTCAGCAACTATCATCAGTGGACACTGTTAGTGACCATGGTCAATGGTTGCTGTCAGTTATTGAAAGACACTGCAACAAAATGGTTGGTGGACAACATCG ACGATGGTGATTCAAGGGATTCCTTGGTGACGATGCTTACAGTATGCCACTGGCAATGATGGTCAGTGTATGGTAATTCGGCGATGGTGGTTTGTGGACG TCATGAGTGATGGTGGCAGGATGCTGTTGCAAGTAACAATGGTCATATGGCATCCCAATGACCACCAACTCGGCCGACATCAACAGCAATTGTTATTGAA GTATGCAACAAAGATAATAAATAATATTTATAACTTACATATTTTCCATTTTCATGATATTGGAATTTGGAATCTGGAATTCTAATTCTAATTTTTATTC GCCTAATTCCATGCGCCTAACGTCACATAAGTGTATTACTGTATTTCATGTTGAGTTTTAATAACAATAATATGCTTAGTTCTTTTCCCTCTTGTATGCA AACTTTAGAAGCTTTTCCCCAGGAATGAATTTGTTGAGAGGGTTTTTTCATAGTTTGAATCCCATATTCTTGCTATTAATTGTGACCATCTTTATATCTT CGCTATTAACTATTGTTCTACTTTTCTTCCGATTCCTAAAGTAAAACGATATGAATTTTGGTTTCAGTTTGTGATGTCCTGTTGATTTTGTTTATTCATG TTTTCTGTGTTCCAGGATGCATTGCTCCTGAAACTTCTCAACAGTGACTTCTTATCAGATCAAGAGAAGTAAGAATTTGTTACTTTCAGGGTTTCAGCTC TCTCTCTCTCTCTCACACACACACACTTTCTATTTTTGTTATTATATTACGAAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_37072; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24823
| Blastp | Mini-ribonuclease 3 from Thermosynechococcus with 41.54% of identity |
|---|---|
| Blastx | - |
| Eggnog | Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)(COG1939) |
| Kegg | Link to kegg annotations (tlr0428) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447387.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |