| Id Trinity | FTRINITY_DN53816_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_23677 |
| Sequence | ATTAACTTGTATAAAGAATATTACTAAAAATATAAAACATTATTATATCCATTTAGTATAGATCTGGAACTTTCTTGCTTGTAACTTGTAAGACTCTTCT TACAAAAAAATAAATTAAAATCAAAGAAAGCAATAGCAGCTGTCATACACACATATGCCACCACATATACATTAGTGGCTGAGTATTAATATCTGCACAT GGTGCGTCCATATAGATCTACTATATAAAATTGTTTTGCTTAATATATAGTTTGACTTTCATATTTGCATTTCAAAAGAAACCATCAAATTAGATCGAGA ATGTGGAAGAGTTTGGATTTTCAAGAAGAGGCAGTTCAATTGATGAACTCTGATCTGAAGGAACTGAGTGTAGCTGCTAATAAACTAGCCCACCATGCTA TCCAACTAGGTGGTAAAGGCTTTGGAGTCTCTTTCTTTGGATTGATTGCTGCTATTGCTGCCATGTATGTACTCTTATTACTCTATTATATTCTCAAACA TAACAATATCTATCTATCTCTTTCTCTTTCTTGTTTATATACTTTACAAGTTTATGGTTTTGCAGTTTTCTTTCATTTTGCAACTTTGTTCAAACATACT AGCTTCTATTTTCTTTCATATAGTTGTTTTATGGGTTTTATTATTCTCTTATAGTGTTGTCGTAACTGGGTCTAACTACATAGTACATACCCCTTACTAT ATCATTTACATTTCTTACAAAACACTAATTTACCTACAACTTTGTAGTTATCTTGTGAAATAGTATATTCTCTATGATTTTCATTGACTAGTTTTATTTG CTTTTTGTAGCTATTTGTTGGTTCTGGATCGTACAAATTGGAAGACAAACATTCTTACATCACTGCTTATTCCATACATTTTCTTCAGCTTGCCTTCAAT AATTTTTGGTGTCTTTAGGTGATTATCCACCACTGTCACGCTTTATTGTTTATCAACTTTGCTCCACCATTTTTCTCACATCATCCTTGTACTTATTTGC AATGCCTCACAGGGGAGAGATTGGAAAATGGATTGCTGTTGTTGCCGTTGTATTAAGGCTTTTCTTTCCAAGACACTTCCCTGGTACAGTACAAATTTTC TAAGACTTTAAGAAGTAATCTTGCCATTGTTCATAACTTGCTCCATGTAGTTACTAGTTAGTGTCTATGAAAACTCTTCATTACTAGCAACCATTGATTA AATATACAGAAAAATCACAACAACATACTCACCTACATCATATAAGGTTATATATCAGTCCTTAACAGAGTAAAATTTGTTAATGAGATTACAAAATGGT CAATTTAGTCAATAGTTTGGCATAAGTACATAGAAATAATGACTATATTTAGTAACCACTCATGATTGGTATGTTAGATTGGCTGGAATTGCCTGGTGCT TTGATTCTACTTATCGGCGTAGCTCCAAGTCTATTGGCAGTGACTTTCAGAGGCGACATTGTCGGGGTGGCGGTATGCCTTATAATTGCATGTTATTTGC TGCAAGAACACATTCGGGCAGCTGGCGGATTCAGAAACGCATTCACTAAAGCCAATGGCATATCGAATACCGTTGGCATTGTCCTTTTGTTAGTTTATCC CATCTGGGCACTGGTGATCATTATCTTCTAGGGGAAGAAATAGCAGTATTTGGAGTTGGCTGATCTTTGTGAATCATATATATCATTTGTCTTGTGTATC ACTCATTTGTTGCAAGTTCATGTCTTGAAATACCCTGTCCCTAGTTTGCATGTGTAAAATGTGAAATCTAATATTATGATTTGTAGTAGCATTTGGACTT TGTTTATCTGTGAAGTTCATGAGTACTTATGTCCTATAGTTTGTATGTGTAAAAATGTGAACTCAAATCTCATTGAAAGAGTTTTGGCTTTGAGCAATGT AAAAATAAAGATAAAGAATGATGTAATATCTTCCTAGTTCCTAGCATCTTTTGAAATACTATATTTTTCATGCTTCCCCAATACACTGTTGGCAGAAAAA CATGTATGTAAAGCACTCCAACATGTGATTGAAAATCACAACATACATTCCATCCTAATAACTTTGGTAACATTTGGTACAAATTGGGAATCATACTACT AACATTGAAGAAGTCGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_37122; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23677
| Blastp | Cold-regulated 413 plasma membrane protein 2 from Arabidopsis with 52.94% of identity |
|---|---|
| Blastx | Cold-regulated 413 plasma membrane protein 2 from Arabidopsis with 62.96% of identity |
| Eggnog | Cold acclimation protein(ENOG4111SCF) |
| Kegg | Link to kegg annotations (AT3G50830) |
| CantataDB | Link to cantataDB annotations (CNT0000256) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448532.1) |
| Pfam | Cold acclimation protein WCOR413 (PF05562.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |