| Id Trinity | FTRINITY_DN53820_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_23316 |
| Sequence | CTTTCTTCTTCTCACTCTTCACACTCTCTCTCTCTCTCTACTGTGATAAAAGAGAAAAAAAAACGTCTTTTTTTCGGGAGAATCATGAGAGAAGAAGACA ATGGTTCTGCAACGGAATTGCCCTTCTCAGATTTGCTTCTTGACCGTGAAAAATGTACCACGATGAGTTTGCAAGACAAACAAAAACTAGTCCATAAGAT TGCTCAACAGTCAAAAGATGCCCCAAATATGCTTCATTCCTTTACTCGCAGGGAGCTTCTAGAAATAATCTGCGCTGAATTAGGTGCAAAGAGAAAGTAC ACGGGATATACAAAGGGCCAAATGATAGAAAATCTTCTCAAGATAATTTCTAAGGAATCCAAGTTGAACAGCATAAAAAAGACCATTGCTCATCCTCCTG CCGAAAGTCACATTGGATCTAAGAGGAAAAAAGTTGCATCTCATGATTTACATTACGCTCCTCAGGAGAATAGTAAGGAGGGAACTGCGAAAGCCTTGCT GTGTCAGAATGTTGCATGCAGGGCTACAATGACTTCAAAAGATTCCTTTTGCAAGAGATGTTCTTGTTGTATTTGTCTTTGTTATGATGATAACAAGGAT CCTAGTTTGTGGTTGACCTGCAGCTCCGATCTTCCCGGTGAGGAGTCATGTGGAAGATCATGCCATCTGCAATGTGCTTTGAGTAATGAAAGCTCCGGCA TTTTGAAGGACAGTTGGGGTACAAAGTTGGATGGAAGTTTTTTGTGTGCTTGTGGAAAATATAATGAATTAATGAGCACATGGCGAAAACAGTTATTGGC TGCCAAAGAAGCCAGGAGAGTGGATATACTCTCTTTACGAGTCTCCTTGGCTCGCAGAATTCTCATAGGAACAGAAGTATATATTGAAGTTCATAAGATT GTAGAAAGTGCCTTCCAGTTACTGAACAATGAGGTTGGACCTCTGGATCAAGAATGTGCACGAATGACACGTGGAATTGTGAGCAGACTTTCATGTGGTG CTGAGGTTCAGAAGCTGTGTTCTAGTGCATTCAAATGCTTTGATTCAAAGTTTTCTAATCTTTTCTCCGATGGTACCGGAAAGAAAGATGCACCAGCAGC ATGCTCTATACGTTTTGAAGAGTGCCTTCCTACCTCGGTGATCATTGTGCTAGATTATGAAGATCACCATTTAAAGAAATTTTTAGGATGCAGGCTTTGG CACCGGATATCAACAATGAACTACCCTGAACAACCTACCTTCATTGTTTTGAGGCCAGAGAAAAGGTTCAAGTTAGAAAACCTCCATCCTTCTACCGAGT ACTTTTGCAAGGCTTCTCTGTTTAGCAGCACTGGGATTTTGAGTGTTGCAGAAGCTAAATGGGTCACAGCTTCTTCAAAAGTCACTACTCCTTCACCTCA TAAATCCCCAGTTACAACCATGCACATGTGTGAACATGACATGAATAAGATAAATACCGAAAAACATTATCAATTGGAATCTGCCAACTCGGACATGAAG CTATCATCTAGAAGACATCTCTTCTTGGAAAACAGCAAGAGCAGGTTTGAAGAGTTCCTAGCCAGGTCTCCATCCGTTGAATCCCTTTCATGTAAACATT TTGCTGCAGTTTCGCCTACCACACCTTCCAAATCCAATGAGATGAGACAAAGTAATGGTTTTACTTCTAGGAAGCGCGTGGAGGAAAATGATTACGAGTA TTCTGTCCGGGTCGTCAAACGTCTAGAACATGAAGGGCACATAGCCGAAATCTTCAGAGTAAAATTTCTCACTTGGTTCAGCCTTAAGGCGTCCCAACAA GAGAGAAGGGTTGTTAGTGCTTTTGTGGACGCGTTGAATGACGACCCTGCAAGCTTAGCAGACCAGCTGATACACACTTTCACAGACGAGATATTTTGTG AGCAAAAATCTCATTGAGTATGCTGTTTGTGTATTATGCATGATATGTCACTGTATGCTTAGATGGCAACTTATTCATAGTTTGAGGGGATGATTTTATA GGTGCAATGTTAGTAACAGTGATCTGCTGTCCCAGATTATGTCTAATACGCTGTCTCGCGTCAATAAAAACATGTCATGTCGATTAAAAACTTTAAATCT TCATCATTATTGTTGTTTTTGTTCATTACTATTGTCGCGAGACAACGTATGAGACAGTAGATCTCTGTCTGATGGGAGAGGGGTTAGTGTTAACATAACA ATTGCATAATCAACTGCACATGCTGTTACATCTAGGAACCTTAATCTAGGACTCTTATCTTTTATTTAAATTGTTTTTATGGATTCTGTTATGCTTCTAG AAACTCTTACAAGTAGACTTCTTTTTCTAATGAACTATATGAAATATTAATATATATTTTTAAGAAACATTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37151; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23316
| Blastp | Protein VERNALIZATION INSENSITIVE 3 from Arabidopsis with 33.17% of identity |
|---|---|
| Blastx | Protein VERNALIZATION INSENSITIVE 3 from Arabidopsis with 33.17% of identity |
| Eggnog | protein VERNALIZATION INSENSITIVE(ENOG410YG10) |
| Kegg | Link to kegg annotations (AT5G57380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438490.1) |
| Pfam | PHD - plant homeodomain finger protein (PF07227.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |