Ll_transcript_23119

Id TrinityFTRINITY_DN53824_c2_g1_i20
Name TranscriptLl_transcript_23119
SequenceCCTATGTTGCATGTGTAATTTCAAATATGGTGATGTGTGCTTTTCATTACTGTTTGTGAGTTGAGTTTTGTAGAGGAGGAAGGGAAATGGAAGGGTTGCG AGCCACAAAATACGAATGTGAGATGACTCTGAAGTCTTCCTTTCTTTTCCTTCCAAAACCCAACTCGCAAACAGACTCCGAGTTAAGTTTTGGAGGTGAA AGGCAAGGCTTGAAGCCTTCTCTTCCCCTCAAAAAATAAACTCGCAAACAAACCATTAGGGTTTTTCCATCTTTCTTCGTAGTCTTTCATTTCAGTCGGT TTTTGGTCTCAACCTCTCGCATCCTTTGCTAGTGTTAACTTTGATTATTTTTACCTAATTATATTGGTGTACACCTTATATTTTTAGAAAATGTTGTGCC AGTCAGCGTTATCGTATGCATAACCATGTACCATAGCATCATGTATACCTTATTCATGCAACATACCCATGCTCTAGTTTTCGAGAGAATGTCGAACCCT ATATCCAGTACATACCACGCACCTGGCTATTGGAGCTGAATATGGAGAAGGGTTTGAGACTTTCAGGACAGATGGACCCTTAAAAGTTGATGTGGTAAGC AATTTAGTCACCATGGACTTTTTCTGAAGCAAGTTTGTACTATGATTTATGATGTAAAGGATACCGATTTTTATTGAAAATAGGACTACTTGAATGATAA ATTGCAAGAAGGTTTTCTTAAACGCATACGCTATGCTATGAAGCCAGATGAAGCTTACGGTCTTATCTTCTCTTGGGATAATGTGGTTGTGAGTTAGCTT TCTTGACTCAAGTTTGTATGTATATTTGCTTTTACCTATGATATATAGCCGTCTTTGCTGTATTATTTAGCTATGTTTTCGAAATTTGAAGTGATGTAAA TTTAGTTTATGGTATTTATTATGATCATATAGATTATAGAATATGCATATTGTTTTGATTGTTAACAACTTGTCGGCCTAGCTACTACGATCGAAAAGTC TTGAAAAGAGAAGAGGGTGGTCATACATAATATGCAGATTTCAGTTTGAATTAACGTGTGATTTGTGTCAGGCTGATACTCGAGTTCTGAAGAGGAAGGC ATGGAAACAACTGGCCTCGGAAGAGGGAAAAGATATTCCCGAAGATGGTGATATACAAAGATTAATGCTTTACGGAGGTGCTGATCAGGTGTTGCGTAAG CATTTTCTCTCGGATAAGGCAGAAAGTGAGTTGGATAGACTAAAGTCGAGGTTCTCTCAATTATATCACGATAATCTTCTAAAACTTGAAAGACCGAAGG AAGGCCTCAAGGACTGGTTGGAAGCGGTTAATACCGCTCGTATCCCCTGTGCCGTTGTTTCAAGTCTCGATAGAAGAAATATGGTAGAAGCTTTGGAGGT ATTGGGGCTCAGTAACTACTTCCAGGCAATTGTGACAGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCCGCCGTCAAGCTGGATCGG AAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTAGAGGAGTAACTGCTGCACACAATTGTACAATGATGGCTGTAGCACTAATTGGAGCTTATCCGG CGTGAGTAATTCACATTTATGATGTTCTTGATGGATAAAGTTTCATATAGTTAATATACAATGTATAATTTGGTCCCGGAAAGTGACTACTTGTGTTGCT TTCGTCCTTGAAAATATGCATCTAAGCAAATTCGTCCTCGAAATTGACATCTAATGCCAAACACGCACATGTAATGTTAATTGCTAACTGGAGTGTCAAC GTTAAGTGTACTCGTGTCGCGTCAGCTAGTTTTAGCTTTTGAGTACATTTTCCTTGAAGATATCCAACTATCATTCATTCCTATATGCCATGATCATTTC AAGAATTATGATATCCGTTAATCGATAGATAATTCGTTGTTATGCTAGTCAAATAGGTTATATCTGCGGCTTTGTGCACTTACCATTATGTGTTAGCATC TTCGTTACGTGTCGACTCGTACTTTCGGGGCTACAGCAACACAAGTCAAATAGTCACTTTCAGGGATCAAATATATTTAACCCAATTCATGAACATACAC ATTGAAACCAGTAGTTTCATGTGTAGTAGTTCCAATATGTGAGGGCATGCATGTATCCAATTTAGTGATTGAATGTGCAAACACTGTTTCCAACATACAC AAACGCATTGAATTCAGTAGTCTCATTTGATGAGGTTTTGAGCCAGCTTTCAAGGGCTAACATCAATCCACCATAATTCTCTCCCATCGAATCGATACAG TAATTCCGTTCGGTTGCACACTTTTAGTACTAGGCTGCTTTTCATGAGATTATTCTCTCGCATTCAGAAAATGATTAAGAAGGTTAGTTCGGCGCAACAG TAAGGTTATTGCCTAGTAACCGTGAGGTCACAGGTTCAAATCCTAGAAACAGCCTCTCCGCTAGCAGAGGTAAGGCTGCATACGTTTCGCTCGCCGAGAC CCCATTAAGTGATAGTCTTATGTACTTGGCCGTCCTTTTTTTCCGGAGAAAATGATTATTGTTTGAAATTTGCAGGTATGATTTGGAACAGGCTGATCTT GCTGTTGCTAACTTCAGTGAACTTTCTGTGATAAACTTGAGAAGACTATTTGCAAACAAAGGTTCTACATTTATGGACCTGCAGAAGCAGATCATAGAGA AAACTCCTCCAAAGAGGAAACTTACAATAGACACTATTTTCTAATATCCTTCAATTCTTATCTTTGGTCTTTTATAATTTTCCTTGTAATTAAATAATTC ATTAGCCTTAGTTTTATTATAAATGTCAAATAAAAATGCAATCAGTTTGGTCTGATGTAATCATATTTTCCAATATCAATTTTTGACTTCTAATTTTGCC ATATTTTCCATTCTTATCTTCTATGTCCATTTCATTTCTGTGCCAAC BLAST
Tissueflowers
Gene nameLI_gene_37176; 
Additional informationdetails; 

Expression of Ll_transcript_23119

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_23119
Blastp5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 26.36% of identity
Blastx5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 24.38% of identity
EggnogHAD-superfamily hydrolase subfamily IA variant 3(COG0637)
KeggLink to kegg annotations (AT4G11570)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019437593.1)
PfamHaloacid dehalogenase-like hydrolase (PF13419.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;