| Id Trinity | FTRINITY_DN53824_c2_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_23122 |
| Sequence | CCTATGTTGCATGTGTAATTTCAAATATGGTGATGTGTGCTTTTCATTACTGTTTGTGAGTTGAGTTTTGTAGAGGAGGAAGGGAAATGGAAGGGTTGCG AGCCACAAAATACGAATGTGAGATGACTCTGAAGTCTTCCTTTCTTTTCCTTCCAAAACCCAACTCGCAAACAGACTCCGAGTTAAGTTTTGGAGGTGAA AGGCAAGGCTTGAAGCCTTCTCTTCCCCTCAAAAAATAAACTCGCAAACAAACCATTAGGGTTTTTCCATCTTTCTTCGTAGTCTTTCATTTCAGTCGGT TTTTGGTCTCAACCTCTCGCATCCTTTGCTAGTGTTAACTTTGATTATTTTTACCTAATTATATTGGTGTACACCTTATATTTTTAGAAAATGTTGTGCC AGTCAGCGTTATCGTATGCATAACCATGTACCATAGCATCATGTATACCTTATTCATGCAACATACCCATGCTCTAGTTTTCGAGAGAATGTCGAACCCT ATATCCAGTACATACCACGCACCTGGCTATTGGAGCTGAATATGGAGAAGGGTTTGAGACTTTCAGGACAGATGGACCCTTAAAAGTTGATGTGGTAAGC AATTTAGTCACCATGGACTTTTTCTGAAGCAAGTTTGTACTATGATTTATGATGTAAAGGATACCGATTTTTATTGAAAATAGGACTACTTGAATGATAA ATTGCAAGAAGGTTTTCTTAAACGCATACGCTATGCTATGAAGCCAGATGAAGCTTACGGTCTTATCTTCTCTTGGGATAATGTGGTTGTGAGTTAGCTT TCTTGACTCAAGTTTGTATGTATATTTGCTTTTACCTATGATATATAGCCGTCTTTGCTGTATTATTTAGCTATGTTTTCGAAATTTGAAGTGATGTAAA TTTAGTTTATGGTATTTATTATGATCATATAGATTATAGAATATGCATATTGTTTTGATTGTTAACAACTTGTCGGCCTAGCTACTACGATCGAAAAGTC TTGAAAAGAGAAGAGGGTGGTCATACATAATATGCAGATTTCAGTTTGAATTAACGTGTGATTTGTGTCAGGCTGATACTCGAGTTCTGAAGAGGAAGGC ATGGAAACAACTGGCCTCGGAAGAGGGAAAAGATATTCCCGAAGATGGTGATATACAAAGATTAATGCTTTACGGAGGTGCTGATCAGGTGTTGCGTAAG CATTTTCTCTCGGATAAGGCAGAAAGTGAGTTGGATAGACTAAAGTCGAGGTTCTCTCAATTATATCACGATAATCTTCTAAAACTTGAAAGACCGAAGG AAGGCCTCAAGGACTGGTTGGAAGCGGTTAATACCGCTCGTATCCCCTGTGCCGTTGTTTCAAGTCTCGATAGAAGAAATATGGTAGAAGCTTTGGAGGT ATTGGGGCTCAGTAACTACTTCCAGGCAATTGTGACAGAAGAGGATGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCCGCCGTCAAGCTGGATCGG AAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTAGAGGAGTAACTGCTGCACACAATTGTACAATGATGGCTGTAGCACTAATTGGAGCTTATCCGG CGTATGATTTGGAACAGGCTGATCTTGCTGTTGCTAACTTCAGTGAACTTTCTGTGATAAACTTGAGAAGACTATTTGCAAACAAAGGTTCTACATTTAT GGACCTGCAGAAGCAGATCATAGAGAAAACTCCTCCAAAGAGGAAACTTACAATAGACACTATTTTCTAATATCCTTCAATTCTTATCTTTGGTCTTTTA TAATTTTCCTTGTAATTAAATAATTCATTAGCCTTAGTTTTATTATAAATGTCAAATAAAAATGCAATCAGTTTGGTCTGATGTAATCATATTTTCCAAT ATCAATTTTTGACTTCTAATTTTGCCATATTTTCCATTCTTATCTTCTATGTCCATTTCATTTCTGTGCCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37176; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23122
| Blastp | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 29.22% of identity |
|---|---|
| Blastx | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic from Arabidopsis with 26.55% of identity |
| Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
| Kegg | Link to kegg annotations (AT4G11570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437593.1) |
| Pfam | Haloacid dehalogenase-like hydrolase (PF13419.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |