| Id Trinity | FTRINITY_DN53825_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_24995 |
| Sequence | CTCAGTCAGTTGACCCAAACCCACGTTACCTAGACAAACCGAAATGTAATTCGGGTCATACCCGACCCAACCCTTTTCCCTCCATTGAAACTTCATTTCA ACTCTACTCCATCAACCTTCGATTCTCACTTCCCTTCTACCAATTCATGCTTCGTCATCTTCCATTCCCAAACCCTAACCTCCGTCATCAATGGTTTCGT CAAAAATCAAGTGGAGGCCGAAGGCCAAAGAAGAAAATCTACCACCGCGTACCCGAACTCGACCGGGTAATGCACCTCCGCAAGAAACCCTCCTCCATTC TCCACCTCAATTCCATCCTCCAATCCCAACACAAAACCAACCACTCCATCCTCCTCCGCGATCTCGAGAAACACGTCGGATTCGTCCAGAAATGGGACTT CATGTCATTGATTGAAAGATACCCTACCATTTTCCGCGTCGGAGGGGTTCCTCCCTCCGTGTCGCTCACCGCCAAGGCGGAGAAGGTGGCGGCGGAGGAA GGGAGGGCTAGGATGATGATGGAGCCGTTGTTGGTTGATAAGTTGAGGAAGTTGTTGATGCTGTGTGTTGATTGTAGGGTTCCGGTTGAGACTGTTGAGC TTGTTGGAAGTGAATTGGGTTTGCCTTGTGATTTTAAGGAGAGTTTTATTCCGAAGTATTCGCAGTTTTTCGCGGTGAAGAATTTTAAGGGAAGGGATTG GCTTGAGTTGGAGGATTGGGATTCTTCTCTTGCTGTCACTGCTAGAGAGACTAGGTTAGCACAGGAAGGAGTTTTAAACATGAAGCCAGATGGGGTTAGG AGGAAGGTGAAGATTTCAAGAGATGGGAACTATTTGGGTCCTTATGCGTTCAAAATGGATTTTCCTGCTGGTTTTAGGCCAAATGTTGGTTACCTTGAGC AGCTTGAGAGGTGGCAGAAGTTGGAGTTTCCTTCTCCTTATTTGAATGCAAGAAGGTTTGATGCTGCTGATCCGAAGTCTCGTAAACGAGCTATTGCGGT TATTCATGAGCTCCTCAGCTTGACCATGGAGAAGAGGATGACATCTGCGCAGCTGGATGCGTTTCATGCGGAGTGTTTTTTGCCATCTAAGTTGCTGCTT TGCTTGATAAAACATCATGGGATATTTTACCTCACTAATAAAGGTATAAGGAGTACTGTCTTCCTAAAAGATGGGTACCTAGGTTCCAACTTGATAGATA AGTGTCCTTTATTGCAATTTAATGATAAGTTTGTGTCACTCTGTGGTAGAGCAAATACTGATATGTGTGACAGTAAGGATTCTTTACAGACCATTGTTTA GAAGTTGAGTTTCATTTTTTGTGTGGCATGGGTACTGCATCCGTACCTATTTGAGAAAGGATTGGGATATTTAACCTGACTAAAGTGCTCTAGCTCTAGC ATATCATTCCTTATTTGAAGAAAAACCATAGAATTACATTTTCTTGATACTTTGTTATTGCAAGTATTTTGTATAACTAGAAAAACTTTGATCAGAAACA AAACCTGACTTCATTAGTTAGACGATTGTATTTGTCCACACCTTGTAAGCTTCAAGAACACGGTTGTGTAAAAAAGTTTATCATACCAAATTCAGGCCCC TCGTAATAGTCTTGGTAAATTTAGGTGGCAATTAGCACAACATGCCCAAATATATTTCCTCAAATAATTAAATTGTTTCTCCTATTTAGACCCTTTTTAT CATGATATAAAATGCCATTGAGGGGCCTATCAAAAGGGAAGGGGGAGGTTTTAGATTTTCGAGGATCATTGTGCTTTCAAAGTTTCAATATTCTGGTGAG TTCTTTAGGAATCAGTAATTTCATATGATCGTGGATTTGATTCACCACCAGACAGGACAGGTGCTTGGATGAAGAGGCTAGGATTGAACGTAACTATTTT CTTGGTTTCTGCTGACAGATTCTAGATTAATATCACTTCCAATGAAATTACTGAATTACCTTCAGCTTCTATCACATACAGATTACATATGTGCAATATT TCATATTGGAAATCAAAGATGCTACTATTATTAGATCACGATGTTAAGGGTAAAATGATATATCAAAATAAAACAATTTTGTAAAGAATCATTGCACGCC AGTTACAATTCATTGAATGTATATTTAACATTATTTTTATTATTATTGTGTACTACTTTGCAATGTGGTTATGTACCTAGAAGGTCAATAGTGCGCAAGA ATGGCATTTGCAAACCACAGTATGTCCTGCCTGAAGTTTATCTGAGGATCTGGTCCAGCTGACAATGGTGAGAAATCTATACCTGGGATTTTATATATCT GATGTGGATTGATGTTTTAAAAAGATTGCATGAACAAGCCAAATGAAGTAACAATCATGTATTTTTGTTGTGTCATGTATATGTATTGTTAAATGTTTTA AGCTAGTTAAAACTGTTTATTAGCATCATTTGTAGGAAACCACCTCCTGGCAGTGGCTTGCTTGTATATCTTATTGACTTCTTTGTTGGAATACTAAAAC TAGGAGGAGTCTAACATGCGAACTAGAGGAAGGTTCGCTTTAAAGCGAACTAGTGTTTTAGCCGTTGGATGTATTTTGTTATGATATGAGCTGTTAGATA TGCGATTGGCTACCTGTAAAGTTTAGAAGTCGTGTTAGAAGGGGAAGACTCTGCATACGTTCAGAAGTCGTGTTCTAACATCACGACTTTTATGGCCTGA TGTGATACCACTCTGAAGTCGTGTAGGGCCATGACTACATCAACCTGGAAGTCGTGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37185; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24995
| Blastp | Protein ROOT PRIMORDIUM DEFECTIVE 1 from Arabidopsis with 30.9% of identity |
|---|---|
| Blastx | Protein ROOT PRIMORDIUM DEFECTIVE 1 from Arabidopsis with 30.9% of identity |
| Eggnog | Plant organelle RNA recognition domain(ENOG410YAEM) |
| Kegg | Link to kegg annotations (AT4G33495) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449282.1) |
| Pfam | Plant organelle RNA recognition domain (PF11955.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |