Id Trinity | FTRINITY_DN53825_c5_g1_i1 |
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Name Transcript | Ll_transcript_24998 |
Sequence | CTTTTCTCTCTCTCTCTCACTTTGGTCCCATTCTCTCTCTCTCTCTTTCTCTCTCTCTTTCTCTCTACCATTGCATAGCATAGCATATCAGTGCAGCAGA AGAAGACACTGCTCCTCGTTTTCCACTTTCTCTTTCTTTTTTAAGAACCCATTTCTTCATACTAAACACCACTCATTCATCAAGGTTTTGGTGCTTTTTT TACTTTGCTTCATAGAATTCCTCAATTTTGGAGCAGCTCAATGATTTTGGACACTCATTTTCTGTGACATGATGAAGAATTTATGCTCTGAGAAACTAGC TGTGGGATTTGCACTTTGGAATGAAGGATAGGCAACGGTGGCGAGCTGAAGAGGATGCTTTATTATGTGCTTATGTCAAACAGTACGGTCCTAGAGAATG GAATCTTGTGTCTCAGCGCATGAACACGCCTCTTAATAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAATTACCTCAAGCCTGGTATTAAGAAAGGA TCGCTTACCGAGGAAGAGCAGCATCTTGTCATCCATCTTCAAGCAAAACACGGAAACAAATGGAAGAAAATTGCTGCGGAAGTCCCAGGTCGAACTGCTA AGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAGAAGCAGCAAAGAGAAACAAAGGTGATTGATAGAACCGTCGACCCGATAAACGATAGCAAGTACGA GCACATACTAGAGAGTTTTGCGGAGAAACTAGTGAACGAGCGCCCTTCGCCATCGTATGTTATGGCCTCTTCTAATGGTTCTTTTATACATACCGATGCA GCAGTGAATGCACCAGCAATGCTTCCTTCTTGGCTTTCGATTTCCAACTCTAATAACACTGCACCTGTTAGGCCACCTTCACCGTCCGTGACACTAAGTC TTTCTCCCTCAGTAGTGGCTGCACCTCCTCCGTGGATGCAATCCGTAAGAGGGCCGGACAACGGTCCTCTTGTTATGGGCAACGTAACGCCTCACGGGTC TGTTTTAGCAGCATATGGTGATAACATGCTTTTGTCCGAGTTAGTGGAGTGCTCTAAAGAGTTGGAGGAAGTGCATCATGCTTTGGCAGCACATAAGAAG GAAACAACATGGCGGTTAAGCCGGGTGGAGTTGCAGCTGGAGTCAGAGAAGGCGAGTCGGAGGAGGGAGAAGATGGAAGAAATAGAAGCGAAGATTAAAG CACTTCGGGACGAGCAGGCGGCTGCCTTGGACAGAATTGAAATGGAATACAGGGAACAGTTGGCGGTGTTGAGAAGAGATGCAGAAACCAAGGAGCAGAA ATTGACCGAGCAATGGGCTGCGAAGCACTCGCGACTTACGAAGTTTCTAGAGCAGGTAGGATGCAGGTCAAGGCTTGCTGAGCCAAATGGAAGATAGATA AACATCACTCAAAAGTTGGAACTAGTTTTCTTCTGATGCCTTTATTATTATGCAGTTTATGGTCATGGTTATTTTGTTATTATGCCTATTCTAAAATGTT ATTACTCATTTCCTATCTATTATAAAAACTTGAGAAATTTGCATTTGCATCTTTATGAATATGAAAACTTTGTTAAAAACCAAATTTCCTGAATGATACA TGTCCTAAGTATAAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_37186; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24998
Blastp | Transcription factor AS1 from Arabidopsis with 64.4% of identity |
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Blastx | Transcription factor AS1 from Arabidopsis with 61.48% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT2G37630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460680.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |