Ll_transcript_23570

• Id Trinity: FTRINITY_DN53829_c0_g1_i14
• Name Transcript: Ll_transcript_23570
• Sequence: TGAAAATAAGGAGGAAAGAGAGTGGTTGTGAAGAAAGCAAAGGTAGCTAGGTAGCGAGAGAAGCATGGGCCAAATACAAACAATTCCAGCGGCACGTTGA AGGCAGTGACTTGCATAACCCAACAACAAATGGCATCACCCATTTCCTAACTCCTCTTTCTTTCACATACACAAGATTAAGATATAAGTCTTTTTTTTTT GTAAGACTAAGAGTGTCCCACAATCCACAATTAGCAAATATTAATTTCTTTTGAAGTGCCCTGTAACTTGAAAATATAAATATACATTTAAATAACATTG GTGTGAAGAAAAACAAGAAACACGAGAGTACTACTTGTAAAGAAAAGCTAAATCCACTCGAAGAAGAAGAGAAGCAACACAAGGACAAATAAAAGAGAAA GGGAAAGAGAGCAGAATAAGGTGTTTCTCTTGGACTGATTCGCTTCAATAAAATCTATTTCTTCCCTACCTCCTCTACTACTCTGTCCAATCCTTCTATC TATTCTCTTTCTTTCTTTCTCTCATCATCAACAACAACAACAACAAAAGGCAAAGAAACATAGTAAAAAAAGAAAAGTAGACACAGTTTTTTCATGGCTG TTCAAGCTCAATATCCATCCAATGTCATTTTTTTAAACAGAAATGGTCAAGAAGAAAATGATTGCTCATTACAACAACCACAATCAAAAGGAGGATACAC TCCATACAACAACAACAATGGAAGTGCTAATTCTCGCAAGAGAGGAAGGGAAGCTATTGTAGCCAATACAACGCCTAATAATATAATGAATCCATTATTC TCAATGCAATCACATCCTCCACAGCTTATAGACCTCTCTCAACTCCATAATCAACACCAAAATGTGGCTTCTATAGGCTTAGGCTTATCTTTTGGTAACC AACAACAACAAAGATTACAACTTCAACAACAACAACAACATGGGAGTCACATATCCTCCTACTTATCTTTATCTTCTGAACGATTTTCTTTACAAATAAA ACAAGAAATGGATGAAATTGATCACTTTCTTCATGTTCTGGGAGAGGATTTAAAGAGTACATTGGCGGCCAAGAGCCAAAGACATGACAAGGAGCTGCTA CGTGCTGCGGAGGAGGCGGTGGCGCGTCGATTGAGAGAAATGGAAGGTGAGGTGGACAAAGCCACTCGTCGAAACGCGGAGCTAGAGGCACGCGCCGCCC AGCTGAGCTCGGAGGCGCAGCTGTGGCAGGCCAAAGCAAGGGCGCATGAGGCGGCGGCGACGTCGTTACAAGTCCAACTTCAGCAGACAATGATAGCCAC CGGAGCCGGTAGATGTCACGGTGGAGATGAAGGTGGCGCAGGGTTATCATGTGCCTTGGATGGGGGTCAGGTGGAGGATGCTGAGTCTGCGTATATAGAC CCGGACAGGGTTGAAGTGATCACATCTGCGGCGGCGCGTGCAAAATGTAGGGGATGCGGGAAGCGCGTGGCCTCGGTGTTGGTGTTGCCGTGTAGACACT TGTGCATGTGTGCAGGATGTGATGCGCATTTTAGAGCCTGTCCAGTTTGCCTTACTCTCAAGGATTCAACCGTTCAAGTCCATCTCTGTTAAAGGGTACC CCACAAGGAATTACCTTACCAGTGCCCTCCAAAAAGGCACCACCAAAAAAACTAGTACAGAAAAAACTGAAGATTCTGCTATAAAAAATTATTAATATAA AATTACGTTTTTGTTTCTCTCTGTTTTTTTATCTTAAATGAAGGGAAGAAGTTCGGTGAGTCTGACAATCTGGTCCTCTTGAAATAACCTTCAGATGGGC CATGGTGGCATTGTTAATTACTCATTTTAAAAAGTTTTTTTTTGTTGTTTTTTTGCTTTTGAAAATCTATTGAGTTAGTTTAATTTATATTAGAAATTTA TAATTTTTAATTAAGGTCACATATTTAATACAATTATATTAATTACTATAAGTGATTT
• Tissue: flowers
• Gene name: LI_gene_37211;
• Additional information: details;

Expression of Ll_transcript_23570

FPKM

• FPAB: 4.7
• FPNAB: 1.5
• LF1: 6.4
• LF2: 2.9
• LF3: 6.5
• LF4: 4.7
• UF1: 7.2
• UF2: 4.7
• UF3: 4.2
• UF4: 4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_23570

• Blastp: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 31.58% of identity
• Blastx: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 32% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT5G45100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430489.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;