| Id Trinity | FTRINITY_DN53829_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_23560 |
| Sequence | TGAAAATAAGGAGGAAAGAGAGTGGTTGTGAAGAAAGCAAAGGTAGCTAGGTAGCGAGAGAAGCATGGGCCAAATACAAACAATTCCAGCGGCACGTTGA AGGCAGTGACTTGCATAACCCAACAACAAATGGCATCACCCATTTCCTAACTCCTCTTTCTTTCACATACACAAGATTAAGATATAAGTCTTTTTTTTTT GTAAGACTAAGAGTGTCCCACAATCCACAATTAGCAAATATTAATTTCTTTTGAAGTGCCCTGTAACTTGAAAATATAAATATACATTTAAATAACATTG GTGTGAAGAAAAACAAGAAACACGAGAGTACTACTTGTAAAGAAAAGCTAAATCCACTCGAAGAAGAAGAGAAGCAACACAAGGACAAATAAAAGAGAAA GGGAAAGAGAGCAGAATAAGGTGTTTCTCTTGGACTGATTCGCTTCAATAAAATCTATTTCTTCCCTACCTCCTCTACTACTCTGTCCAATCCTTCTATC TATTCTCTTTCTTTCTTTCTCTCATCATCAACAACAACAACAACAAAAGGCAAAGAAACATAGTAAAAAAAGAAAAGTAGACACAGTTTTTTCATGGCTG TTCAAGCTCAATATCCATCCAATGTCCTTTTTCTAAACAGAAATGGTGAAGAAGGAAATGATTTCTCATTACAACAACCACAATCAAAAGGAGGAATCCT TCATCAATCTCATAGTCCATACAACAAGGGAAGTATGAATGGTAAATGCTTTCATATTTTTACTATAATCTTCTTCCATGCATATATATCAATCACATAA GATGCTAATTATTTTGTATTTCATTGGCAGGTGATGATAATTCTAATTCTGTCAAGAGAGGAAGAGAAGCTATTGTAGCTAACACAATCCCTAATAATAT TATGAACCCATTGTTCTCTATGCAATCACAAAATCCACAACTTATTGATCTTTCTCAACTACATAACCAACAACAAAATGTGGTCTCTATTGGCCTTGGC TTATCCTTTGATCAACAACAACAAAGATTACAACTTCATCAACAACCTCAACAACAACAACTACATGGGTGTTATTCATCCTCGTACTTATCTTTATTGT CTGAAGGGTTTTCTTCACAGATGAAACGACAAAGAGATGAAATTGATCAATTCCTTCATGCCCAGGTACAAAGTTTCTTCATTTTTTACTATTTTCATTG ATTTTTTTTAGTGAGAAGGGTCGTGAAAATTGAATGATGGGTAATTCGGTATTGTGTGGAATTTTATTAGGGAGATGAATTACAGCGTACATTGGCGGAG AAGCGGCAGAAGCATTGCCAGGCTCTGTCACGCGCGGCAGCGGAGGTGGTGGCGCGTCTTTTAAGAGAGAAAGAAGCGGAGATGGAGAAAGCCACGCGCC AAAACGCGGAGTTAGAGGCTCATGCAGCTCGGTTGAGCGCGGAGGCGCAGATGTGGCAGGCCAAGGTGAGGGCGCAGGAGGCGGCGGCGGTATCTTTACA AGCCCAATTGCAGCAGACCATGATGGCACTCGGAGCCGGCGGGTGTCACGGCGGCGACGGCGGCGGCGCAGGGCTGTCATGTGCCATGGATGATGGCCAG GCGGAGGATGCTGAGTCGGCTTATATTGACCCAGACAGAGTGGAAGTCATTGCACCAGTGGAGGCGGCGCGTGCAAAATGTCGGGGATGTGGGAAGCGCG TGGCATCGGTGGTGGTGTTGCCGTGTCGGCACTTGTGCATGTGTGCAGAATGTGATACTCATTTTAAAGCGTGTCCAGTTTGCCATATTCTCAAAAATTC AACCATTGAAGTGTTAATCTCTTAGGGGTGCCCCACATGCAATTACGTTTTGCAATGCCCTCTATAATTGCACAAACAAAAAAAGAGAAGAAAAAACATA AGATTCTGATAAAAATTAATTAATATAAATAAGGTTACATTTTTGTTTCTCTTTTTTTAATTTAATTGATGGGCATGAAGTTTGGTTTGAGTCTGAGAAA TCAGACCCTCTTGTATGAAATTGAGAGATTACCATAAGGAATTTAATTTTTTATTTAAAAAAGAAACCTTTAGACTTAGTTATGTATCTTCTGTTTTACT GAAGTTCTATTGAAATTTTATATAATACATTATATTCTTTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37211; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23560
| Blastp | Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 29.37% of identity |
|---|---|
| Blastx | BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 40.26% of identity |
| Eggnog | protein binding zinc ion binding(ENOG4111S1X) |
| Kegg | Link to kegg annotations (AT3G12920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420281.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |