Ll_transcript_23561

• Id Trinity: FTRINITY_DN53829_c0_g1_i6
• Name Transcript: Ll_transcript_23561
• Sequence: TGAAAATAAGGAGGAAAGAGAGTGGTTGTGAAGAAAGCAAAGGTAGCTAGGTAGCGAGAGAAGCATGGGCCAAATACAAACAATTCCAGCGGCACGTTGA AGGCAGTGACTTGCATAACCCAACAACAAATGGCATCACCCATTTCCTAACTCCTCTTTCTTTCACATACACAAGATTAAGATATAAGTCTTTTTTTTTT GTAAGACTAAGAGTGTCCCACAATCCACAATTAGCAAATATTAATTTCTTTTGAAGTGCCCTGTAACTTGAAAATATAAATATACATTTAAATAACATTG GTGTGAAGAAAAACAAGAAACACGAGAGTACTACTTGTAAAGAAAAGCTAAATCCACTCGAAGAAGAAGAGAAGCAACACAAGGACAAATAAAAGAGAAA GGGAAAGAGAGCAGAATAAGGTGTTTCTCTTGGACTGATTCGCTTCAATAAAATCTATTTCTTCCCTACCTCCTCTACTACTCTGTCCAATCCTTCTATC TATTCTCTTTCTTTCTTTCTCTCATCATCAACAACAACAACAACAAAAGGCAAAGAAACATAGTAAAAAAAGAAAAGTAGACACAGTTTTTTCATGGCTG TTCAAGCTCAATATCCATCCAATGTCCTTTTTCTAAACAGAAATGGTGAAGAAGGAAATGATTTCTCATTACAACAACCACAATCAAAAGGAGGAATCCT TCATCAATCTCATAGTCCATACAACAAGGGAAGTATGAATGGTAAATGCTTTCATATTTTTACTATAATCTTCTTCCATGCATATATATCAATCACATAA GATGCTAATTATTTTGTATTTCATTGGCAGGTGATGATAATTCTAATTCTGTCAAGAGAGGAAGAGAAGCTATTGTAGCTAACACAATCCCTAATAATAT TATGAACCCATTGTTCTCTATGCAATCACAAAATCCACAACTTATTGATCTTTCTCAACTACATAACCAACAACAAAATGTGGTCTCTATTGGCCTTGGC TTATCCTTTGATCAACAACAACAAAGATTACAACTTCATCAACAACCTCAACAACAACAACTACATGGGTGTTATTCATCCTCGTACTTATCTTTATTGT CTGAAGGGTTTTCTTCACAGATGAAACGACAAAGAGATGAAATTGATCAATTCCTTCATGCCCAGGGAGATGAATTACAGCGTACATTGGCGGAGAAGCG GCAGAAGCATTGCCAGGCTCTGTCACGCGCGGCAGCGGAGGTGGTGGCGCGTCTTTTAAGAGAGAAAGAAGCGGAGATGGAGAAAGCCACGCGCCAAAAC GCGGAGTTAGAGGCTCATGCAGCTCGGTTGAGCGCGGAGGCGCAGATGTGGCAGGCCAAGGTGAGGGCGCAGGAGGCGGCGGCGGTATCTTTACAAGCCC AATTGCAGCAGACCATGATGGCACTCGGAGCCGGCGGGTGTCACGGCGGCGACGGCGGCGGCGCAGGGCTGTCATGTGCCATGGATGATGGCCAGGCGGA GGATGCTGAGTCGGCTTATATTGACCCAGACAGAGTGGAAGTCATTGCACCAGTGGAGGCGGCGCGTGCAAAATGTCGGGGATGTGGGAAGCGCGTGGCA TCGGTGGTGGTGTTGCCGTGTCGGCACTTGTGCATGTGTGCAGAATGTGATACTCATTTTAAAGCGTGTCCAGTTTGCCATATTCTCAAAAATTCAACCA TTGAAGTGTTAATCTCTTAGGGGTGCCCCACATGCAATTACGTTTTGCAATGCCCTCTATAATTGCACAAACAAAAAAAGAGAAGAAAAAACATAAGATT CTGATAAAAATTAATTAATATAAATAAGGTTACATTTTTGTTTCTCTTTTTTTAATTTAATTGATGGGCATGAAGTTTGGTTTGAGTCTGAGAAATCAGA CCCTCTTGTATGAAATTGAGAGATTACCATAAGGAATTTAATTTTTTATTTAAAAAAGAAACCTTTAGACTTAGTTATGTATCTTCTGTTTTACTGAAGT TCTATTGAAATTTTATATAATACATTATATTCTTTCAAAA
• Tissue: flowers
• Gene name: LI_gene_37211;
• Additional information: details;

Expression of Ll_transcript_23561

FPKM

• FPAB: 0.8
• FPNAB: 1.4
• LF1: 0.3
• LF2: 0.2
• LF3: 1.6
• LF4: 0.8
• UF1: 0.2
• UF2: 0.3
• UF3: 0.1
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_23561

• Blastp: E3 ubiquitin-protein ligase BOI from Arabidopsis with 30.73% of identity
• Blastx: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 28.57% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT4G19700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420281.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;