| Id Trinity | FTRINITY_DN53840_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_24465 |
| Sequence | CCATAATTAGTTGAAAAATGTTTTTTAAATTAAAAGTTAATAATTAATTATTTATGATCAATCACGACCGATGACACATGTAATGATACAAGTTATGGGA CATTACTAAGTTTTGTGTAACGTGGTTGGGGAGGAGAGGAAAGAAGATTAGAAGAGTAAAGTAAGGTGAGGTGACGTGGCATATCCATACCCAATAACAA AAACCCATCACTCCACACCTCTTCGACAAATCCCCAAATCTCATTCATTCATTAATTCATTCTCTCAATTTTTTCCAAATCCACTCTCACTTTCTCACAA CTCACACCGTTCCTCTTTCTTTCCCTTTACTTTCATCAACGCCGCTTATAGATACTATAAGTTCGTTTATTAATGTCCTCCCACAGAAATAAGTGTAGCA GCAATATTGCAGCTAGGATTTTCGATCGTCAAATTCGCACTCCTCCTCCTGCCACTACTGTGTCATTTAATCCTTGCAGGTTCATTATGCCAGGCAATTC TATGAAAATTTGGTACCCAGTTACACGCTATATGAGGTTGAATGCCCAGACCATTCATTTCGTAAATTCACTGATGATGGTCAATACCTTATATCTTTCA GCAGAAATTTCCAAGACTTGATTGTTTATCGTCCTAGATGGCTTTCTTTTTCTTGCAAAGATGAAGATTGTGATAAACATGATTTGCCATCCAAAGCAAA GAGATTTGAGAGCTTTTTCACTCAATTATACTCTGTACCACTTGCTTCTTGCAATGAACGTATATGTAAAGATTTCTTTCTTTACATGGAGGGTAATCAG TTTGGACTCTTTGCCACTTCTACGGCCCAAATTCATGATGCACCTGCTGTTGGAGGAGCTATCCAGGGTGTCCCTTCAATTGAAAAGATAACTTTTATCC TCTTGAGATTGGAAGATGGAGTTATTCTTGATGATAAGGTCTTCTGTAATGACTTTGTTAATTTGACCCATAATATGGGTGTGTTCTTGTATGATGACCT GTTGGCAATTGTATCACTTCGCTATCAAATAATTCACATTCTCCAAATTAGAGACTCTGGGAACCTTGTTGATGTACGTGCTATTGGGGAATTCTGCCGT GAAGATGATCAACTTTTTCTCAATTCAAATGCTCAGGGCAATGCATTTTCTGACAAAAATAAACAGCATCAGTTGCCCGGGGGACACATAGAACATAACG TGCATCAAGGACAGCCTAATCCGGGGAATTCTTTTTTAAGTGGTATTAAGCAGCGATTGCTTTCGTTCATATTTCAGAGCATATGGAATGAAGAGAGAGA TGATAACTTGGTTAGTTTTCTAAATTTACTGCACAATCCCTTCTTTCCACGTTTCATTTGGCTTTTCACTTTTGTTACGGATTCAGGCATTTTTTATTTT GTCTTGGAAAGGCATAGGCACATCGTCTGTTTCAATATGTTAGTTTCTTTTTCTTTTTTCTATGATGCTTCAAGCTTCAATTTCTTTCCTTTTATTCTTC ACAGCAAATCATTTTAAGATTTGCTTGTGAGTTATGTTTATGGGCATAATTTGTTTCTATGCGTTCATGCGTATTTCTGTGTCTACAGGCAGATGTACGT GGGGGTGGACAGGTTTGTTGTCCGATATGTCCATTATAATGCAGTCTCACTTTTTGGTTAATTTAGGAGATGTTGCAACAAAGGAATTCTTTTAATAAAA AGATTTCCATTTGAGTAATATAAAGTATTTATTATCTATCCACTTAGTGTGTGAGTTGTGTTCAGAGTGTGACCACTTATTGACTTCATTTATGTATTTA ACTAATTGAGGGATTAATTCTTCCTAAACTATAATTTTTTACCAGTAATTCCTATTATGTTATTTTCATTTTTCCATTTGTTGCATCTCCATACCACCCA TCCTTTCGTAGTATAAAGCAATTCATATTTGTAAATGACTAAAAATGGAACTTGGTAAATGAGGGCTGTATCTCAATACCTTGTCAAATGTTTATCCTGC TATTTCTCCTAGTTACTGTTCTGTGATTTTTGCTATCTTGACTTTCCCTGTTTCTGAGATGTGGTTTTAGAAGACTTTTGGGTTTTTCTATCTGCATGAC TTTTGGGTTTCTCTATCTTCTCAATTTTTTTTTGGTTTACATGATTCATTTTTTTAATTATTCTGCTTTACATGTTTTCGATGGTCTACCAGAGGATTCA AACACTTAGGAAGAAATTTTACTTCCACTTTCAAGATTACGCTGATCTGATTATCTGGAAGGTAGAGTCTGAGACATTTTCATCTTAAACAACAATTTTA TCACAGCTTTATCATCCTGACAAGAACATTTTATTAATGATTCAATCATTTTTACACTAATTTTTTTTCTGTGCATACAATAAGTCATGTAACAAGTTGC ATGCGTTCAACTCCTGGACAGGTGCAGTTCTTGGACCGACACCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGGGGTGAGTTCTACGCTTTTTTTAT TTACTTTCTAACTTCTAAGTAATACCCTTCAAAGTCACTCAGTAAGTAAAAATATAAGTTACTTACAGTAACATGAGGAGAGAACCAGATAAAGTAAAAA TTGTATAATGTCTTGTTCATATGGCTTGAGTATCTAGCTCCCTTCCTCCTTGAACTAGAGCCCCATAGCCTCAGACAATTCTACTTTTAGCCATTTAACT GATTAAACGTTCCAGAATGTTTCAACCTGCACCAGATACTAGAGTGGAATCATTATGCCTTTTGTTGAAGTAGCATGACAAATATGTTGACCCTTCATGT TTTGAAGCCTCAGGTGTCACGAAATGCTGATCACCACCCAGCTTTCGTTGCAGTATATAACATGGACACAACTGAAATAGTTTCTTTTTATCAGAATTCA GCAGACGAACTTTATCTGTTGTTCGAGCAGTTCTGTGACCACTTCCACGCAACATCAAGAAATTCAATGCATATGAATTTCATATCATCTCATTCAAATA ATGTTCATGCACTGGAACAACTACGGAGCATAAAAGATAAGGCTAGCAGCTCATCACAGTTTGTGAAGAAGATGCTTGCCTCTTTGCCTTTCAGCTGTCA GTCACAGAGTCCTTCTCCTTACTTTGATCAATCTCTTTTCCGATTTGACGATAAGCTGATTTCTGCAACTGATCGGCATAGGCAATCAACTGATCACCCT ATCAAGTTCATTTTAAGAAGGCATCCATATTCTCTCAAATTTAAAATCAAACCAGGTCCTGAAGGTGGTAGTATGGATGGTCGTGCAAAGAATATATCTT CATTTATTTTTCATCCAATTCTGCCACTTGCTCTCTCTGTTCAACAGACTTTGTTCTTGCACCCTTCAGTTGTAAATATTCACTTTCGAAGATGATCACC AAATCAACACCATGCTGTCACAATTTACTTCTTTTCCTCCAATTTGTTTAAAATGTTTAAACTAGTAACCAAGAAGTAGCCAAGTTCAGTTGTTTTCCTA CTACAACTTGTCTTCTGAATTATATTTTGTTGTTGACTAGGGATTACAATGGGGTGTTTTAACCAATGTGAGGGTGTCTTAGGGGAAGGGCCATGTCTAT ATATAATATATATATACAACCAGAGTAACAAAATGTGCATCTATTTTATACACCCTCATTCTATTATTTATCGTTTATGTTTAATTATCATTCTCTTTTA AGAAAATAATATAAATGTCAAAGCTTTTTTACCTTAGTTAAGGTTCACTTGATTCTATAAGTCCATCTTTTATTGAATGGACTTATATATATAAATGATA TCAATGGGTGATGTATTATGGACTTGTATCTTGAAATTCTTAGGTAAGGTTCAGTTGAAACTCAAAGGTCCAATATACCCTTTCCTGTCCATTGATTTCT TTGCAGAATCACACATGACTCTCCTTTTTTGGATTTCTTATATCCTGTGAATTATACATCATCTCCTATGTCATTTCACCTATCAAAATATTCCTTTTAT CCTCACCCATTTTTATTACTATAATTACTTCATCTTGTCTTATCATGGACACCTCATTGTTTCATAGGGTTATGCACGTGGTAATAGCTTGACATTATTT TACAATGGAGACAATGACCATAAATAATTGGCTTTTAAAGGTTGTTGTATTGAGTTTACTTTTGTCCCAGAACTAGTTTTAGTTTTATGAAGTGGTCCAA TCAATGAAGACTGTATTGTGGTTAGCAGTGTCTGTCATAAAAGTTTGAAGTCCAAATTGAAGTCCTCAACCACTCTAAAATCTAAATACAACTTGGCCAC TGCTTTGCTTTGGCTCTCTAATTTCTCAAAAGTCACCTTTCCTTAGTTTTCACCCATTTTCAATCAAAACCCACAAAACAATTTCAAGAGCTCAAACATT TATATAAAGGACTTCTATTTTCATTATTAAAAACGGAATTATAAAATTGACTTTCTATAGTTAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37340; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24465
| Blastp | Light-mediated development protein DET1 from Lycopersicon with 80.31% of identity |
|---|---|
| Blastx | Light-mediated development protein DET1 from Lycopersicon with 73.43% of identity |
| Eggnog | de-etiolated homolog 1 (Arabidopsis)(ENOG410XSK5) |
| Kegg | Link to kegg annotations (778329) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444612.1) |
| Pfam | De-etiolated protein 1 Det1 (PF09737.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |