| Id Trinity | FTRINITY_DN53843_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_23801 |
| Sequence | AATTTTTTAGGCTGAAGGTATATTGTTATATAGAAAAGAACGGAAAAAAAATCAGATAGCAACTGGGAAGAGTGTAGTGTTGTATAGAAGCAGCGAATTA AAGCCTTTTGTTATAGAATTAAAATTAGTAAATAAAAAGCCTAGCACCACCAACTTGGTTTTCATAAAAGGAAGAAACGAATTGGCAACTAGAGAGAGAA AGGGAGTGAGGCACGACGCGTTAACCTCATCCTCCAATTCTCTCTACTCTCTCTCAGTCAAGCCAAACAGATAATATATCTTCCCAAAGTTAGCACATTA TACTTCAGTATACAATTTTTGCAGCTAGATCATATTGGTTAGCATATTGTCTTGCTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTG TTGCACAATGGGGAATTCGTCCTCAGCTTTCACTGAGATCCAGTATGACAGGCAAGATTGCGTCATCCAGCCACAATGTTATGAGCAGAGTAAGCTTTAT GGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCATCATACACTATCCAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGG CTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAATGCTAACAAATCTGAAATTAAGAGCGCTTATCGGAAGCTTGCCAGGA ATTATCATCCAGATGTTAACAAAGAACCTGGAGCAGAAGATAAATTTAAGGAAATCAGCAATGCATATGAGGTATTATCAGATGATGAGAAACGATCCAT ATATGATAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGAAATGAACCCTGGGGATTTCAGCAATCCTTTTGATTTGTTTGAGCAACTTTTTGACAACATG AATCGTGGCTCGAGCAGAGGTCCTTATAATGGACCAGTTGATGGTGAAGATGAGTATTACAGTCTTCTTTTGAACTTTAAAGAAGCAGTCTTTGGAGTAG AAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTTGCAATGGTTCTGGGGCTAAACCAGGGACTACACCAACCAGATGCAACACTTGCGGTGG TCAAGGCCGGGTTGTCTCGTCAACAAGAACTCCCCTAGGTGTCTTCCAGCAGCAGATGACATGCTCTACATGTAACGGGGCTGGAGAAATCTCAACACCT TGCAATACGTGTTCTGGGGATGGTCGAGTGAGGAAAACAAAGCGGATAAGTCTGAAGATTCCAGCTGGTGTGGACTCTGGTAGTCGTTTAAGGGTCCGAA ATGAAGGGAATGCTGGAAGGCGAGGGGGTTCTCCTGGTGACCTCTTTGCTGTAATTGAGGTTATCCCAGATCCTGTCCTAAAACGAGATGACACCAACAT TTTATACACCTGCAAGATTTCATACATCGAAGCAATCTTGGGGACTACAATTAAGGTTCCGACCGTAGACGGGATGGTGGATTTAAAAGTTCCAACTGGG ACCCAACCAAACACAACACTTGTTCTGGCTAAGAAAGGTGTTCCTCTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGTGTTCAAGTTGAAA TCCCCAAAAGACTGAGCAGTGATGAGAGAAAGGTTATTGAAGAATTGGCTGATTTAAGCCAAGGTAAGACTGCCACCAGTAAGAGATAATGTTTTGTGGG AAGCTCTGTATCTGTCCATGTATTTCTACCTTTTGAGTCTTCTCCTTGCATAGATTATTCTTGATTATACACTTTCTGGTGTCAATTTAGCTGCTATTGG ACTCTGGAGGGGTGAGAATGTGTACTTTGTCCTTATATACATAGACAGAGATGAAGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGT GGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCCTTAAATTAAGAAACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGAT ATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTGGTTCATGAACAAAATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATG AGTGTTGGTTATTTGTCTCACTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37346; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23801
| Blastp | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 75.45% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 75.45% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462097.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |