| Id Trinity | FTRINITY_DN53843_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_23813 |
| Sequence | AATTTTTTAGGCTGAAGGTATATTGTTATATAGAAAAGAACGGAAAAAAAATCAGATAGCAACTGGGAAGAGTGTAGTGTTGTATAGAAGCAGCGAATTA AAGCCTTTTGTTATAGAATTAAAATTAGTAAATAAAAAGCCTAGCACCACCAACTTGGTTTTCATAAAAGGAAGAAACGAATTGGCAACTAGAGAGAGAA AGGGAGTGAGGCACGACGCGTTAACCTCATCCTCCAATTCTCTCTACTCTCTCTCAGTCAAGCCAAACAGATAATATATCTTCCCAAAGTTAGCACATTA TACTTCAGTATACAATTTTTGCAGCTAGATCATATTGGTTAGCATATTGTCTTGCTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTG TTGCACAATGGGGAATTCGTCCTCAGCTTTCACTGAGATCCAGTATGACAGGCAAGATTGCGTCATCCAGCCACAATGTTATGAGCAGAGTAAGCTTTAT GGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCATCATACACTATCCAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGG CTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAATGCTAACAAATCTGAAATTAAGAGCGCTTATCGGAAGCTTGCCAGGA ATTATCATCCAGATGTTAACAAAGAACCTGGAGCAGAAGATAAATTTAAGGAAATCAGCAATGCATATGAGGTAAAACTGTAGATTATTGATCTCAGATA GTCCTTATGCATATCTAGTAGCAACTGGTCTTCTGTAATTAAATTTCTCTTGCAGGTATTATCAGATGATGAGAAACGATCCATATATGATAGATTTGGA GAGGCTGGGCTTAAAGGTTCTGAAATGAACCCTGGGGATTTCAGCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37346; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23813
| Blastp | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 64.23% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 55.9% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462097.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |