Ll_transcript_23816

• Id Trinity: FTRINITY_DN53843_c1_g1_i15
• Name Transcript: Ll_transcript_23816
• Sequence: AATTTTTTAGGCTGAAGGTATATTGTTATATAGAAAAGAACGGAAAAAAAATCAGATAGCAACTGGGAAGAGTGTAGTGTTGTATAGAAGCAGCGAATTA AAGCCTTTTGTTATAGAATTAAAATTAGTAAATAAAAAGCCTAGCACCACCAACTTGGTTTTCATAAAAGGAAGAAACGAATTGGCAACTAGAGAGAGAA AGGGAGTGAGGCACGACGCGTTAACCTCATCCTCCAATTCTCTCTACTCTCTCTCAGTCAAGCCAAACAGATAATATATCTTCCCAAAGTTAGCACATTA TACTTCAGTATACAATTTTTGCAGCTAGATCATATTGGTTAGCATATTGTCTTGCTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTG TTGCACAATGGGGAATTCGTCCTCAGCTTTCACTGAGATCCAGTATGACAGGCAAGATTGCGTCATCCAGCCACAATGTTATGAGCAGAGTAAGCTTTAT GGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCATCATACACTATCCAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGG CTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAATGCTAACAAATCTGAAATTAAGAGCGGTATTTTCTTTGTACCTTCCT TATTTGGGTGGATGATTATAGAATGATTTATATCTCCATAATTATAACTTTATATTTATTCAAATGTAGCCATAGTATGTTGATTTGCTAATTAGTTGTT GGATTTTTTCGCGGATAAGTAAACAGACAAATATTTTAGTGTTGATATGGTTCGAATGTAAAGCAAAATTGATTACCATGTTATGCTTTAGTATTAGCTG GTAAATGATTACCCCCTTTTATATAACTCTTCATGCTTCCTTTGAGCTTGAGAAATCAAAATACTTTAAAAGGTGCACCTCAAAACTCATATATGTACAA GTACAAGAGAAGTTCCATAAAGGAAATTCAAAGCATATAACTGCCAAAGAAGTCTGTCGAAACATCAAAAGGAACTAGAGTAATGACATCACTCAAGTGG GTAGGATTGCTTAGTTACCTATATATAAGAACTTATGCTTGTTGTTAAGACACAATGGCTTCCCATTCCCCTGGCTCTTCAGTCCTATTAATACCAAATA ACCATGGGGGTTACCTTTCCAAACCAATGATTTACAAATCTAAGTTAGTTACACTATTTAGTGTTGAGACCTTCGATTGTTCTTTAGCATTCTATGCCAA GGTATTATATAGAATGAGCATCAAATATATCTCTTTTCTCCTTTCTATCCAATACCTGAATTTTGACAGCTGTGATTGTGAATTTCTTATTAATTGAAGT CTGTATATTATTTGCTTGGTTGTGCATACTGTTTGCTGGTTAGTGGTCTGGTATCTATATCATTGCTATATCAAATCTTTTACTTTTGACATTTCAGCTT ATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAGTGAGTTCCCCACTCATATTGAACATCTTTTACTTTCCAATACCGCTTCTTTGTCATGCC TGTCGCACTGTATTTTTTACTATTGCTGTTTACATGGTTTGGATGCTTAATTGTGATGCTTATATCGTCCATTCTAAAAATTGTTTTCCTACACCACCTC AACAACTTGTTAGCTTAAATCATTCGTCAAAGCGCCCCTTCACATGTCAGTTTTACTAGATGTATAATTTTCTTGTTTTCAAAATCATTTGATTAATATT GCATGTTGTTGAACTATTGTGTGTATTCACTCTATGCTGCAGAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCA GATGATGAAAAGCGATCCATATATGACACATATGGAGAGGCTGGACTTAAAGGTTCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATC TGTTTGAGACATTGTTCGAGGGGATGAATGGTGGGATGAACTCTAGAGGTTCTCCGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTT GAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATTGGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACG AAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTCGGGTTGTCTCACAAACAAGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCT GCAATGGGAGAGGAGAAACTTCAACACCTTGCAATGCGTGCTCTGGTGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCTGGAGT GGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGTAATGCTGGGAAGCGTGGGGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGAT CCTGTCCTTAAAAGAGACGATACCAACATTTTGTACACCTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGACG GCACGGTCGACTTAAAAATCCCATCCGGGACTCAACCGGGTGCGACACTTGTTATGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGG TGATCAACTAGTTCGCGTGCAAGTTGAAATCCCTAAGAGGTTGAGCAGTGATGAGAAAGATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACT GCCACCAGTAGGAAATAAAATTTTGTGGAACATGTGTGTTCTTTCATGTATTTTTTTACCCTTACAAATATTCTTCTTTCATGGATACTTCATTCTTGAC CATGACTCTGAGAAGTTGCCAGCATGTGTTGGTAGATGTAGGTTATTAGTTTTTATTAGACACAGGTGGATATGAATAGCAGAAGAAACTAGGGATCTTT TTCTTCATTGGACTTGTATGTTATTTTTGTAGGAGTTATAATTTATACCTCAGGTGCATGCTTTCTCTATTTTATTAGATATGATTATTGGAGACAAAGT TGAGTTATATACACCCATTTATAATTTGTTGTTATAAATTAAAAGAATGACTTTCCCT
• Tissue: flowers
• Gene name: LI_gene_37346;
• Additional information: details;

Expression of Ll_transcript_23816

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.2
• LF2: 0.1
• LF3: 0
• LF4: 0.2
• UF1: 0.3
• UF2: 0.3
• UF3: 0.5
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_23816

• Blastp: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 80% of identity
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 79.26% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414866.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;