Ll_transcript_23818

• Id Trinity: FTRINITY_DN53843_c1_g1_i17
• Name Transcript: Ll_transcript_23818
• Sequence: AATTTTTTAGGCTGAAGGTATATTGTTATATAGAAAAGAACGGAAAAAAAATCAGATAGCAACTGGGAAGAGTGTAGTGTTGTATAGAAGCAGCGAATTA AAGCCTTTTGTTATAGAATTAAAATTAGTAAATAAAAAGCCTAGCACCACCAACTTGGTTTTCATAAAAGGAAGAAACGAATTGGCAACTAGAGAGAGAA AGGGAGTGAGGCACGACGCGTTAACCTCATCCTCCAATTCTCTCTACTCTCTCTCAGTCAAGCCAAACAGCTAGATCATATTGGTTAGCATATTGTCTTG CTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTGTTGCACAATGGGGAATTCGTCCTCAGCTTTCACTGAGATCCAGTATGACAGGCA AGATTGCGTCATCCAGCCACAATGTTATGAGCAGAGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCATCATACACTATC CAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGGCTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAAT GCTAACAAATCTGAAATTAAGAGCGGTATTTTCTTTGTACCTTCCTTATTTGGGTGGATGATTATAGAATGATTTATATCTCCATAATTATAACTTTATA TTTATTCAAATGTAGCCATAGTATGTTGATTTGCTAATTAGTTGTTGGATTTTTTCGCGGATAAGTAAACAGACAAATATTTTAGTGTTGATATGGTTCG AATGTAAAGCAAAATTGATTACCATGTTATGCTTTAGTATTAGCTGGTAAATGATTACCCCCTTTTATATAACTCTTCATGCTTCCTTTGAGCTTGAGAA ATCAAAATACTTTAAAAGGTGCACCTCAAAACTCATATATGTACAAGTACAAGAGAAGTTCCATAAAGGAAATTCAAAGCATATAACTGCCAAAGAAGTC TGTCGAAACATCAAAAGGAACTAGAGTAATGACATCACTCAAGTGGGTAGGATTGCTTAGTTACCTATATATAAGAACTTATGCTTGTTGTTAAGACACA ATGGCTTCCCATTCCCCTGGCTCTTCAGTCCTATTAATACCAAATAACCATGGGGGTTACCTTTCCAAACCAATGATTTACAAATCTAAGTTAGTTACAC TATTTAGTGTTGAGACCTTCGATTGTTCTTTAGCATTCTATGCCAAGGTATTATATAGAATGAGCATCAAATATATCTCTTTTCTCCTTTCTATCCAATA CCTGAATTTTGACAGCTGTGATTGTGAATTTCTTATTAATTGAAGTCTGTATATTATTTGCTTGGTTGTGCATACTGTTTGCTGGTTAGTGGTCTGGTAT CTATATCATTGCTATATCAAATCTTTTACTTTTGACATTTCAGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAGTGAGTTCCCCACT CATATTGAACATCTTTTACTTTCCAATACCGCTTCTTTGTCATGCCTGTCGCACTGTATTTTTTACTATTGCTGTTTACATGGTTTGGATGCTTAATTGT GATGCTTATATCGTCCATTCTAAAAATTGTTTTCCTACACCACCTCAACAACTTGTTAGCTTAAATCATTCGTCAAAGCGCCCCTTCACATGTCAGTTTT ACTAGATGTATAATTTTCTTGTTTTCAAAATCATTTGATTAATATTGCATGTTGTTGAACTATTGTGTGTATTCACTCTATGCTGCAGAGAACCTGGTGC AGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCCATATATGACACATATGGAGAGGCTGGACTTAAAGGT TCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATCTGTTTGAGACATTGTTCGAGGGGATGAATGGTGGGATGAACTCTAGAGGTTCTC CGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATT GGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACGAAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTCGGGTTGTCTCACAAACA AGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAATGGGAGAGGAGAAACTTCAACACCTTGCAATGCGTGCTCTGGTGATGGTC GAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCTGGAGTGGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGTAATGCTGGGAAGCGTGG GGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGATCCTGTCCTTAAAAGAGACGATACCAACATTTTGTACACCTGTAAGGTGTCTTAC ATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGACGGCACGGTCGACTTAAAAATCCCATCCGGGACTCAACCGGGTGCGACACTTGTTA TGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGGTGATCAACTAGTTCGCGTGCAAGTTGAAATCCCTAAGAGGTTGAGCAGTGATGA GAAAGATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACTGCCACCAGTAGGAAATAAAATTTTGTGGAACATGTGTGTTCTTTCATGTATTTT TTTACCCTTACAAATATTCTTCTTTCATGGATACTTCATTCTTGACCATGACTCTGAGAAGTTGCCAGCATGTGTTGGTAGATGTAGGTTATTAGTTTTT ATTAGACACAGGTGGATATGAATAGCAGAAGAAACTAGGGATCTTTTTCTTCATTGGACTTGTATGTTATTTTTGTAGGAGTTATAATTTATACCTCAGG TGCATGCTTTCTCTATTTTATTAGATATGATTATTGGAGACAAAGTTGAGTTATATACACCCATTTATAATTTGTTGTTATAAATTAAAAGAATGACTTT CCCT
• Tissue: flowers
• Gene name: LI_gene_37346;
• Additional information: details;

Expression of Ll_transcript_23818

FPKM

• FPAB: 0.7
• FPNAB: 0.2
• LF1: 0
• LF2: 0
• LF3: 0.2
• LF4: 0.1
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_23818

• Blastp: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 80% of identity
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 79.26% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414866.1)
• Pfam: DnaJ C terminal domain (PF01556.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;