| Id Trinity | FTRINITY_DN53843_c1_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_23819 |
| Sequence | CAGCTAGATCATATTGGTTAGCATATTGTCTTGCTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTGTTGCACAATGGGGAATTCGTC CTCAGCTTTCACTGAGATCCAGTATGACAGGCAAGATTGCGTCATCCAGCCACAAGTGAGTTCTATGATAAAATATTTGTTTGGTATGTTTGTAGAATGG TAGTATCGAAAGAGAGTACGTTAATATCAACTTCTAAAATCCACATTATATTTAATAATAGATTTGGGGTTTGCAGTTCCTATTCATGATTAATGTTGTT GCACTTGTATTACACCATCGGAAAAAGCCAAGTCACCTTTAACATTGTTGTCTTCTATCATATCATCAACAGAGGTATAACCATAAGTTGCTGTAGTTTG CTATTTGATTACTTTAATTGTCATCGGTAGGACCGTAGGAGCTTTATTGCTTGTACTGAAATTCTAAGAAACCAGGGTTCTATAAATAATTTTTTCCCCA GAAACTAGTTTTGTGATCTATCTATCATTAAATATTAAATCTTCTCCAACATTGTACTAAAAAAATACACAGAATTTTTCAGCATACATCATTGTGCTAA AGAGTGTAATTTCTGAAAGTCATATTCCTTGCAGTGTTATGAGCAGAGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCA TCATACACTATCCAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGGCTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGA GTTTCAAAAAATGCTAACAAATCTGAAATTAAGAGCGCTTATCGGAAGCTTGCCAGGAATTATCATCCAGATGTTAACAAAGAACCTGGAGCAGAAGATA AATTTAAGGAAATCAGCAATGCATATGAGGTATTATCAGATGATGAGAAACGATCCATATATGATAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGAAAT GAACCCTGGGGATTTCAGCAATCCTTTTGATTTGTTTGAGCAACTTTTTGACAACATGAATCGTGGCTCGAGCAGAGGTCCTTATAATGGACCAGTTGAT GGTGAAGATGAGTATTACAGTCTTCTTTTGAACTTTAAAGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTT GCAATGGTTCTGGGGCTAAACCAGGGACTACACCAACCAGATGCAACACTTGCGGTGGTCAAGGCCGGGTTGTCTCGTCAACAAGAACTCCCCTAGGTGT CTTCCAGCAGCAGATGACATGCTCTACATGTAACGGGGCTGGAGAAATCTCAACACCTTGCAATACGTGTTCTGGGGATGGTCGAGTGAGGAAAACAAAG CGGATAAGTCTGAAGATTCCAGCTGGTGTGGACTCTGGTAGTCGTTTAAGGGTCCGAAATGAAGGGAATGCTGGAAGGCGAGGGGGTTCTCCTGGTGACC TCTTTGCTGTAATTGAGGTTATCCCAGATCCTGTCCTAAAACGAGATGACACCAACATTTTATACACCTGCAAGATTTCATACATCGAAGCAATCTTGGG GACTACAATTAAGGTTCCGACCGTAGACGGGATGGTGGATTTAAAAGTTCCAACTGGGACCCAACCAAACACAACACTTGTTCTGGCTAAGAAAGGTGTT CCTCTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGTGTTCAAGTTGAAATCCCCAAAAGACTGAGCAGTGATGAGAGAAAGGTTATTGAAG AATTGGCTGATTTAAGCCAAGGTAAGACTGCCACCAGTAAGAGATAATGTTTTGTGGGAAGCTCTGTATCTGTCCATGTATTTCTACCTTTTGAGTCTTC TCCTTGCATAGATTATTCTTGATTATACACTTTCTGGTGTCAATTTAGCTGCTATTGGACTCTGGAGGGGTGAGAATGTGTACTTTGTCCTTATATACAT AGACAGAGATGAAGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCC TTAAATTAAGAAACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTG GTTCATGAACAAAATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTCACTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37346; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23819
| Blastp | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 78.05% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 78.05% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462097.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |