Ll_transcript_23804

• Id Trinity: FTRINITY_DN53843_c1_g1_i4
• Name Transcript: Ll_transcript_23804
• Sequence: AATTTTTTAGGCTGAAGGTATATTGTTATATAGAAAAGAACGGAAAAAAAATCAGATAGCAACTGGGAAGAGTGTAGTGTTGTATAGAAGCAGCGAATTA AAGCCTTTTGTTATAGAATTAAAATTAGTAAATAAAAAGCCTAGCACCACCAACTTGGTTTTCATAAAAGGAAGAAACGAATTGGCAACTAGAGAGAGAA AGGGAGTGAGGCACGACGCGTTAACCTCATCCTCCAATTCTCTCTACTCTCTCTCAGTCAAGCCAAACAGCTAGATCATATTGGTTAGCATATTGTCTTG CTGAAGATATATTGGATGGCCATTACACCTTTTGGTAGTACATCTGTTGCACAATGGGGAATTCGTCCTCAGCTTTCACTGAGATCCAGTATGACAGGCA AGATTGCGTCATCCAGCCACAATGTTATGAGCAGAGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTCTTTCTCGAATTTCCATGCATCATACACTATC CAGTGTGGGTTCTTCTCAAACATTGCATTCTCGCAGGGGATCAAGGCTGACTGTTAGGGCTAATGCAGATTACTATTCTGTCCTTGGAGTTTCAAAAAAT GCTAACAAATCTGAAATTAAGAGCGCTTATCGGAAGCTTGCCAGGAATTATCATCCAGATGTTAACAAAGAACCTGGAGCAGAAGATAAATTTAAGGAAA TCAGCAATGCATATGAGGTATTATCAGATGATGAGAAACGATCCATATATGATAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGAAATGAACCCTGGGGA TTTCAGCAATCCTTTTGATTTGTTTGAGCAACTTTTTGACAACATGAATCGTGGCTCGAGCAGAGGTCCTTATAATGGACCAGTTGATGGTGAAGATGAG TATTACAGTCTTCTTTTGAACTTTAAAGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTTGCAATGGTTCTG GGGCTAAACCAGGGACTACACCAACCAGATGCAACACTTGCGGTGGTCAAGGCCGGGTTGTCTCGTCAACAAGAACTCCCCTAGGTGTCTTCCAGCAGCA GATGACATGCTCTACATGTAACGGGGCTGGAGAAATCTCAACACCTTGCAATACGTGTTCTGGGGATGGTCGAGTGAGGAAAACAAAGCGGATAAGTCTG AAGATTCCAGCTGGTGTGGACTCTGGTAGTCGTTTAAGGGTCCGAAATGAAGGGAATGCTGGAAGGCGAGGGGGTTCTCCTGGTGACCTCTTTGCTGTAA TTGAGGTTATCCCAGATCCTGTCCTAAAACGAGATGACACCAACATTTTATACACCTGCAAGATTTCATACATCGAAGCAATCTTGGGGACTACAATTAA GGTTCCGACCGTAGACGGGATGGTGGATTTAAAAGTTCCAACTGGGACCCAACCAAACACAACACTTGTTCTGGCTAAGAAAGGTGTTCCTCTGCTGAAT AAAAAGAATATGAGGGGTGATCAATTGGTTCGTGTTCAAGTTGAAATCCCCAAAAGACTGAGCAGTGATGAGAGAAAGGTTATTGAAGAATTGGCTGATT TAAGCCAAGGTAAGACTGCCACCAGTAAGAGATAATGTTTTGTGGGAAGCTCTGTATCTGTCCATGTATTTCTACCTTTTGAGTCTTCTCCTTGCATAGA TTATTCTTGATTATACACTTTCTGGTGTCAATTTAGCTGCTATTGGACTCTGGAGGGGTGAGAATGTGTACTTTGTCCTTATATACATAGACAGAGATGA AGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCCTTAAATTAAGAA ACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTGGTTCATGAACAA AATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTCACTAAAAAA
• Tissue: flowers
• Gene name: LI_gene_37346;
• Additional information: details;

Expression of Ll_transcript_23804

FPKM

• FPAB: 7.7
• FPNAB: 8.2
• LF1: 14
• LF2: 18.9
• LF3: 21.1
• LF4: 18.8
• UF1: 14.7
• UF2: 18
• UF3: 21.1
• UF4: 20.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_23804

• Blastp: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 75.45% of identity
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 75.45% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462097.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;