| Id Trinity | FTRINITY_DN53843_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_23808 |
| Sequence | CTTTGAGTGACTCTAAAAATATCCTCTTTTTTCTCTCTCAATCCGATAAGCAAAATAGTGAGTGAAAACCCCAACTTCTCTTCTTTCACTCACCACACTC TATCCATCCATTTCTCTTCTCTTCTCTTCTCGCCGTATCAGATATATTGAATTGGATGGCTATTGCACCTTTTGCTACTACTCAATGGGGAATTCGTCCT CATCATATTTTCACCAAATCCACTATCATGGGTAGGGTTGCATCTTCCACTTCTACCCACAATGTTACAAGCAGGGTAAGCTTTATGGCTGCCCCAAGTT CAAGCTTTTTCTCTCGGGATTCCTTGCGTGGGCTATATGACATGGGTTCTTCTCAAACTTTGCATCGTCGCAGGGGGTCAAAGTTGATAGTTAGAGCAGA AGCTGATTACTATTCTGTTCTCGGAGTGTCAAAAAATGCTAGCAAATCTGAAATTAAGAGTGGTATGTTTCCGTGATGCCCACTATCTCCCATCATTGTA AAATCCTGATTTGTATTGAGGATTATTTGTTCGATTTTCGAATTGTCAACCGTAACGTTGACCCTCTTGGGAACTTCCCACGAAATATTCCAGAAACTGA GACTAAACATCTATTTCATTCAATTTTTTTTTGTAATGTGCAATAGAAAAAAGATTTCAAAAGGAAGTTTAAAATTAGTGGGTGGAAAGCATTATGGTTA GGGCTAATGATAGATGGTTGTGATTACTGAATTTTTATTGCCTGTTGGATGGAAAGCATCCTGCATATGATTTACTGGTTTATGCATATTTTTAATGGTT TAATTGCCTGTTGAGGCATTGCAACATGCCAACATCATATTTTTATGTTTGACATTTCAGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAA CAAGTGAGTTCCCCACTCATATTGAACATCTTTTACTTTCCAATACCGCTTCTTTGTCATGCCTGTCGCACTGTATTTTTTACTATTGCTGTTTACATGG TTTGGATGCTTAATTGTGATGCTTATATCGTCCATTCTAAAAATTGTTTTCCTACACCACCTCAACAACTTGTTAGCTTAAATCATTCGTCAAAGCGCCC CTTCACATGTCAGTTTTACTAGATGTATAATTTTCTTGTTTTCAAAATCATTTGATTAATATTGCATGTTGTTGAACTATTGTGTGTATTCACTCTATGC TGCAGAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCCATATATGACACATATGGAG AGGCTGGACTTAAAGGTTCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATCTGTTTGAGACATTGTTCGAGGGGATGAATGGTGGGAT GAACTCTAGAGGTTCTCCGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAG ATAGAGATTAGGCGATTGGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACGAAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTC GGGTTGTCTCACAAACAAGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAATGGGAGAGGAGAAACTTCAACACCTTGCAATGC GTGCTCTGGTGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCTGGAGTGGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGT AATGCTGGGAAGCGTGGGGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGATCCTGTCCTTAAAAGAGACGATACCAACATTTTGTACA CCTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGACGGCACGGTCGACTTAAAAATCCCATCCGGGACTCAACC GGGTGCGACACTTGTTATGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGGTGATCAACTAGTTCGCGTGCAAGTTGAAATCCCTAAG AGGTTGAGCAGTGATGAGAAAGATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACTGCCACCAGTAGGAAATAAAATTTTGTGGAACATGTGT GTTCTTTCATGTATTTTTTTACCCTTACAAATATTCTTCTTTCATGGATACTTCATTCTTGACCATGACTCTGAGAAGTTGCCAGCATGTGTTGGTAGAT GTAGGTTATTAGTTTTTATTAGACACAGGTGGATATGAATAGCAGAAGAAACTAGGGATCTTTTTCTTCATTGGACTTGTATGTTATTTTTGTAGGAGTT ATAATTTATACCTCAGGTGCATGCTTTCTCTATTTTATTAGATATGATTATTGGAGACAAAGTTGAGTTATATACACCCATTTATAATTTGTTGTTATAA ATTAAAAGAATGACTTTCCCTâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_37346; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23808
| Blastp | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 80% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 79.26% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414866.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |