| Id Trinity | FTRINITY_DN53845_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_25100 |
| Sequence | AAAAAATTTCGTCCGGTTGATAAACCCTAATTCCTACCATCACCATCTTCAATTCCTTCACTCTCCAATGGAAGAACACTCACAGGAACCGCCGCCGCAG ATTCCCCAAACCATCATCTACGATACACTCACTCCCAACTCTCTCTCCGCCGCCACAGTCTCTCAACTTTCCGACCAACCCCAACCCCAACCGGAACCTA ATTCCTACTCCGTTTTCCGCAACGAGATCTCCCTCGACACAATCCAATGTGCTTCTTCCGACATCCCCGCCGTTGATTTCTTCTCCCTCAATGTTTCCGA CGAACCTTCCGCCCCGGATTCTCTCCCTGAGCCAGAGGCTCCGCCTGCTGAGGTGTATGAGCCAAAGACTCCGGCTCTCGCGCCCGAGGCGAAGCTCGAG AGTGGTTGGTTTCGTGGGAATTGCAAATTCAAGAGCCCCATGCTTCAGCTACATAAAGAGATAGTGGATTTTAGTAATTTTTTGTTGCCGACCCAAGAAG AGAAAGCTGCACGGGACACAGCAATAGAATCTGTATTTGGGGTTATAAAACACATATGGCCTCATTGCCAGGTCGAAATCTTTGGGTCTTTTCGAACAGG GCTGTATCTACCAACTAGTGATATCGATGTCGTGATTCTGAAAGCAGGCTTGCCAAATACACAGATGGGTTTGAATGCACTTTCTAGAGCATTGTCACAA AGGGGCATTGCTAAGAAGATACAGGTCTGTCAGATTGCTTAAATATCATTATTTTTATGTGAAGAAAAAATAATCAACGTTGTTAGGTTTTTTAAGTACC TGATGCACTTGTGAATTTTCCTCAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAGAAGTGGGTTTTCATTTGATATAAGGTTC AACATTGTTCTTAAAATTTTGTTGCACAAGTTTGTTTATTTCTTCATTGTTATATGCTTACACAAGTTTGTAGTGTTCATGTGCCATCATTTAGTATGTC TTAGTTTACTGGTCATTTTATTGTCCTTGGTATTGGATGAGTTGTTTAACTTGCTCACCTTTGCAGTTTGCACATGCTATTTATGTTGAATTTTTATTAC AGTTTTCAATATTTCCATAAAATAACTTCCAAATTATAATTAGAAGTGCTGGAGAAGATATGATGGATGCTATTGCTTACTGCTTGGGGAAATGGAAGGA CGTTATTTGTCCATATTGTATGCTATGCATGTCTTTAAATTTTTTCGTTGAAGTGATTTTCGGGCTCCATATGAAAGTTATTTTTTGCCCATGGCGTGGT AGATCCGTCTGTCTCTGTCAAGCATCTAAAGTCATCTTTAATCTAAAGTCTTAACAAGGAATCATGAAGGCAACGATATTAGTTATATATTACCAGTTAC TACTAACTGTGACAAGTGACAATCAGATTATTCTTAATGTGGTGCTTTGATAGTTGTATAGATGCATGGTTGTCACCTACTCTTTTGTTTTGGATTATCG TGTTGCCCAATTTTGTGTAGAGTGCAGAACAAAACCTATTTCAATATTAATTTTTGTAATATCATTCGTTCACTGAGGAGTTATGGCCTTGTTTCAGTTT TGACATAGATGGTGGACCCAAAGCTGCTGAGTATATTCAGGAAGCAGTGGCTAAGTGGCCGCAACTACGGCCATTGTGTTTGATTTTGAAAATATTTTTG CAACAAAGAGAACTAAACGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGTCATGCTGTTGGCGGTGTTGCGGAATACCCGTGAGAGTCAAG TTTCTGCAGAGCACAACTTGGGGGTCCTTTTGGTGCATTTTTTTGATTTCTATGGACGCAAATTGAACACCTCAGATGTTGGTGTGTCTTGTAATGGGGC AGGAACTTTTTTCTTAAAGAGCAGTAAAGGGTTTACTGCAAACAAGGGACGTCCATTTCTTATTGGTATTGAGGATCCACAGGTTTTTCCTATAGAACTG CCTTTTGCTTTCATTAATTTTAAATTACTATTTTACCCATAAAAAGTAAAGCAAGAAGGTAGCTTTTTAAGTGGACTTTTTTGTAACTTATCTCTGGCTC TTACAGCGTTTGTTGGTAAAGTTGGGTCGGGATAACGTGATTCTCTCTGGTTCTCTGCTTAGTTCATTTTAGAGGACTCTCCATTTTTGTACAGAGATTA CAGCTATTCTTGAGCTTCAGATTTTTTTTGTTTTTTATCAGTCTATTTTGAAGGATGTGTCATATCTTTCTTCCCTCATCATTACCTTTATATCTCTCTT TTTCTTATAAAAAAGTTGCGCTGATACTCTTTCCCCCTAGCCATACTTTGCTTGGCCCATCAACTTTTCAAAAGTAATGAATATTCTTAGTTGACATTTC ATTTCTAAAGCCATAATCCATATTTTTTGGGAGCAATTACTCTATAATTTATGTAGTAGTTAAAACTTGAAATATGAGTGTTTGCTTATCACTGCTAAAT AAATATCTTAGTGGAGAACTAGAGATTATCTAAGCTGGAGTTTTATCTATATTCTCCATTTTATCAATTAATTGCCTTGCAATTTAGTCTAATATACAAA TTCATATAATATGAAAATGGAATGACATGTATACTATGGACTATGAAGACAAATTTTTATCATGGGTTTGAGTGATTGACAAGAACTTTCTTCTTGGCTG AATTAGGCACCTGACAACGACATTGGGAAGAGTTCCTTTAATTATTTCCAGATTAGATCAGCTTTCGCAATGGCATTCTCAACTTTGACAAATCCCAGGA TCATCCTTAGTTTAGGACCCAACAGGAGCATTCTTGGCACTTTAATTAGACCAGACCCTGTCTTGATGGAGCGTAAAGGAGGGTCGAACGGGGAGGTGAC TTTTAATAGTCTGCTTCCTGGTGCTGGCGAGCCATTACAACAACAGTATGGAGCACATGATATCCTATGCAATTGGCACATTGATGATGAAGAAGAACCA CTACCACGCGGAATGGATATTTTGACACCCAGCAAACGCTCTTCATCAAAGAAGAGAAAATCTGCATATTATGAAAATTCCAATAATAAGCTAAAGGAAA ATGGAGATAGTTGGACCAGGAATGAGAATGGGTCTAGAAAAGAGAGCAGTACAAGGAGGAAAAAAAGAGAGAAGTGGTGACACTTGCTATCTTTATTAAA CCAGAGGGGGCCAGTAGTGGAGTTTGTTACAGACAAAATGGCCACTGTAATTTGATCAGTGGTTTAAAAGTGCAGGAACCAGGCAGCATAAAAGTTGAAG CTAATTTGGAAGTTCAAAACCTTATCACAGACGATCCAAGGTGTGCACTTTGTGTATCAGATCACATCCATGATGTGTTTTTGTTATAGTTGTAATATGT CCAATTTTTTTAGAGAATTATCTAACTTTGGAAATCATAGAAGAAACAGGAGTATGTTTTATTGTCAATTTGTCACAATGAGCATGTTATAGTTTATCTG ATTTTGATAGTTTCCTCTTGTTCCCCAATTATCTTCAACATTTGTGGCAACATAGTTATTATGTTTAATAATGAACATTATCATTAATTTGAATGGTTAT TAAGTTTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37362; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_25100
| Blastp | Non-canonical poly(A) RNA polymerase protein Trf4-1 from Sophophora with 39.55% of identity |
|---|---|
| Blastx | Non-canonical poly(A) RNA polymerase PAPD5 from Homo with 40.71% of identity |
| Eggnog | domain) containing(COG5260) |
| Kegg | Link to kegg annotations (Dmel_CG11265) |
| CantataDB | Link to cantataDB annotations (CNT0000375) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425299.1) |
| Pfam | Nucleotidyltransferase domain (PF01909.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |