| Id Trinity | FTRINITY_DN53846_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_24417 |
| Sequence | AAAGCAGTGGGGATAAATTTACAAACTTGCACTGTATGTTAGTTACGTACCTATAGGTACCGGAGTGGATTAGGGTTTTTTCCAATCCAAATTCCACTCT TCTATTGACATGGCGAATCGTACTGATCCAGCAGCGAAGAGCATAAGAGGTACGAACCCTCAAAACCTGGTCGAGAAGATTCTCCGATCCAAAATCTATC AGAATACCTATTGGAAGGAACAATGTTTCGGCTTAACGGCGGAGACCTTAGTCGACAAGGCCATGGAACTCGACCACCTCGGCGGAACCTACGGCGGCAA CCGTAAACCCACTCCGTTCATGTGCCTTGTCATGAAGATGCTCCAGATTCAGCCCGAGAAGGAAATCGTCATCGAGTTCATCAAAAATGAAGATTACAAA TATGTGAGGATACTTGGTGCTTTTTATCTGCGTTTGACTGGTTCTGATATTGATGTTTACCGCTACCTTGAGCCCTTATACAATGATTATCGGAAACTGC GGCAGAAGTTAGCTGATGGACAGTTTTCATTGACACATGTTGATGAGGTTATTGATGAACTTCTCACTAAAGATTATTCTTGTGATATTGCTATGCCCAG AATCAAGAAAAGGTGGACTATTGAATCTCTTGGTGCACTAGAACCTAGACGAAGTGCACTTGAAGAAGATTTTGAAGAGGAAGAAGAAAAAGAAGATAGT GACCAGCCTGCCGATGAGCATGAAGATAGGACCCATGAGAAGGTGCATCACTTTCCTTTTTAATTGAAATATATCCTTTTTATCTTATTACAATTGTTTA ATGTTAGTAGTTCTGATGTTTTGGTTTAATTTTGGAATGATTTATAGGATTACTATCGTGGGCGAAGCCCTACAAGGGAAAGGGATAGGGATAGAAGACG TGATACTCATAGACACAGGTACTGTTCTCTCCTTGAAAGTGTTTTATTACTTCATCTGGGTTTATGTATATGTGAATCTTGTCAACGAAAACGCCTACCT ATTGTTTGACTTTTTTCTTTTAATTTGCTTTTTGACTTTGCTACTGTAGGAAGTATCGACTCTTGGATCCAAAGCCCCAATTCATTCCTAATTTTCTTAT AATTATATAATAATATGACTCTTTGGAAATTACAAGCTATTTTTGCTGCATCTATGCATGAATTATGCTGGAAGCTGTTATTGAACTTGCACAATTGTCA CAGCCACACACACACACTGCATATCCCGTCTCAAAATATAGTTCAATTTCCACTCTGGCATTCAGAGCCATATGTGGTGTACAACTGCTTCCTACAGTAC ATTTTCTGATCCTGCCAGGTTTCTCTGCACTGACAGTGTGCAGTGAGAAGTATGATGGGTCAGACATTTATGTTGCATGTACATGAATCTGAATGATGGT TTAAATGTTTAATTGCTGCTTGTAGTTCAAGCAATGGATTGCTTGACATTTCATTTGTAGTTGTAGATGGTCACATTTCCTTCATGCTGTAATGTGCATT AAAATCTTAACACATCACTAGTGAAAGTGTTAGTGTTCATCATTGGATTTCCTTTAGCAACTTCAGAATGACGTGACCATGTCACTATTTAGTGTAAATT GACACATTTTGTAATTAGTGATGAATTTTGCTGGCTTGTCAAATTTATATCTGCGTTTGCTTTTTAATGTCTTTTTCATAGGGATCGTGACTACGACAGA GA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37363; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24417
| Blastp | Pre-mRNA-splicing factor 38 from Arabidopsis with 85.87% of identity |
|---|---|
| Blastx | Pre-mRNA-splicing factor 38 from Arabidopsis with 85.87% of identity |
| Eggnog | RNA splicing(ENOG410XQ3F) |
| Kegg | Link to kegg annotations (AT2G40650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452266.1) |
| Pfam | PRP38 family (PF03371.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |