Ll_transcript_24685

• Id Trinity: FTRINITY_DN53853_c8_g2_i1
• Name Transcript: Ll_transcript_24685
• Sequence: CAGGCTAGGATTTTGGGTCTTAATGCTTCATACTATCTCAAGTCTGGTGGTCATTTCGTTATTTCAATCAAGGTTTGTTCGCATACCCAATCTTTTGTAT CGGTTTTTATTGCAATAAGACTCGTACTAGTACGGGGACCGGTTCACTGGCTCTCTGGTTGAACTGGTGTGTACGGTACTGTTGGGTAAACATAAATCCG ATCCCAACCTGTCTCGTTGATATTCCTATAATGCTTGAATGGCAATGTTATATATGGCTAAAAAAGTACTTGTTCTAACTTAACATTGTTGTATGTTACA GGCAAATTGCATAGACTCAACAGTCCCAGCAGAGACAGTGTTTGCAAGTGAAGTGAACAAGCTGAAAGCAGATCAATTTAAGCCATTTGAGCAAGTTACT CTGGAGCCATGTGAGCGTGACCATGCTTGTGGTGTTGGTGGATACAGAGTGGCCAAGAAGAAGAAAGATGCTGAATAAGTAGATTGCTGTTACTACAATC ATGTAATATCACTGGTGTTTGAATTCTAGAACATGTTAAATTTTGTTAGCTTTTATGGAGATTATTATTGTTATGTTGTATGATACTCTATATGGTTATC CAAAATTGGTTTTACATTTTATGCTTTTTAATCACTAGTTGCTTCTAGAGTTTTTGCTGGCTATATTACTGGAGTTTTACTGTAACCATAATTGTTAAAT TTTATTAGTTTTTATCTCTTTTCCAAGGAGCTATATCTATAATTGGTAATTTGGGCTAAGTCTAAGTAGCCCGCTCCTACATTTTGGGTAGATGTTGCAT GAAAAATGTGTTCATCCGTCCTAAAAGCTGAACATGCCCTTTTGATCCACGTGTCGTTTCGGC
• Tissue: flowers
• Gene name: LI_gene_37417;
• Additional information: -

Expression of Ll_transcript_24685

FPKM

• FPAB: 0.1
• FPNAB: 0.3
• LF1: 0.2
• LF2: 0
• LF3: 0.2
• LF4: 0.7
• UF1: 0.3
• UF2: 0.1
• UF3: 0.4
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_24685

• Blastp: -
• Blastx: Mediator of RNA polymerase II transcription subunit 36a from Arabidopsis with 75% of identity
• Eggnog: Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (By similarity)(COG1889)
• Kegg: Link to kegg annotations (AT4G25630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464671.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;