Id Trinity | FTRINITY_DN53864_c1_g1_i3 |
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Name Transcript | Ll_transcript_23323 |
Sequence | AGAAGACAGAAAATGATAAGAATAATAATTAATTAGAGAATGAATATATAATAGAATAAAGTATCTCCTTAAATCAATTTATTATTTGACAATAAAAACT CATAGGAAGAAGAGAAATAAGAGAAGGAGTTATGGTGTAAGGAGATACTTTATTCTTGACGGAGAAGCTGCAATTAGTTGCATAAATATGCTCCTATAAC TCCACTTCCATACACCCATCATCTTCTAATTCAATTCAATTTCAATTCGATGGTGATCAGCCGTATATTTCATCGGAGAATTTGGACCACCGCCCGGCGG TTCCTCCGTCCCACCGCCTTAGTCCCCTTTGAGAAGTGTTCATTACCATCATCTCCTCTCTTCCAAAAACATATTCCTAATAATTTTAAGCATGGGAATC GGTTTTGGTTTTCTACTCAATCTATGGTTGATCTTCTTCCCATGGGTAAGATAGTTGATGTGCCGTTGGCACAAACTGGTGAAGGTATTGCAGAATGCGA ACTTCTCAAATGGCATGTGCAAGAGGGGGATTATATTGAAGACTTTCAACCAATTTGTGAAGTCCAAAGTGACAAAGCTAATATTGAAATTACAAGTCGA TACAGAGGAAAAGTTGCTAGCATTCTCTATGTTCCTGGTGATATTGTCAAAGTTGGTGAAACCCTTTTAAAGATTTTAGTTGATGAGTCTGCTGCATTTC CTTCAGTGACTTCCGGTGATTCAGAAAATGAAAAGTCACTTGATTCTGATCAGATAGTAGTTGATGAGGCTGCATTTACTGCAGTGACTTTCTGTGATTC AGAAAATGTGAATTCACTGGATTCGGATCTTGAAAAAGAGAATCGAGCTGGAGTTCTATCAACACCTGCTGTAAGGAGTCTGGCAAAGCAACATGGTATA GATATAAATGAAGTGTGTGGAAGTGGAAAAGATGGGAGAGTTTTGAAAGAAGATGTGCTCAGTTTTGCTGTCAATAAAGGAATCATTAGAAATCCATCTG CTGTTTTGAATTCTGATCACGGGGAGAAGCCTCCGGGAGAAGAGGGATACAACAGTTTTGTGGCAACTAAATATGAGTCGCCTTCTGAGGACAGGATACT TCCCCTTAGGGGATACCAAAGAGCAATGGTAAAATCGATGTCTCTGGCTGCCAAAGTCCCGCATTTCCATTACGTGGATGAGATAAAGTGTGATGCCCTA TTGGAGCTTAAAACATCTTTCCAGAAAAATAATCCTTATAAGGATGTCAAGTACACTTTCCTTCCAATATTAATCAAATCTCTTTCAATGGCCCTCACCA AGTATCCCTTTGTGAATAGTTGTTTCATAGAGGATTCATTGGAAGTCGTCCTCAAAGGTTTGTTTCTTAACATGACTGGATGAACTATTGTCACAATCAT GCTGCCCTTCTTTGAAGCTTGATTGTGTTTGATTTTTTGTACAGTGAATATAAGGTTTTTTCTTCATTAAAAATATGGATTTGAGGGGAGGAAACAACTT TAAATTGTGATGAGGTGAAAGAGTTTGTTCTTATTAGCCAATTCTCCCGTTGGCTCTGCATCAGCTTGGCTATATGTCTAAAACAAGGTTCATGTAGATA GAGTACATGTGAGTATGTGACTTCAGTGCATGATGTAAGTGTGTGAGAAGTTCTTCTCAAGTAGCGAATCTCGTACAGTTTGGCACACTGATCTTAATCG CGTATGAGATTGACAAGGATAATGCTTTCATGGTTTCTTTGCATAATATATTTTTATATTGTTCTCATGTTAGTAGCTGGCTTAAAAAGTACTTAATGTT GAACCTTTTTCTGGTTAATGTTTATTGTTATGTGGTGGCTGTTAATTCAATGATTTAGTTGAGACAGTAATAACAGCAGCCAAATACATGAATCAAATGA CAACATAATGCTCTACCATAACAACATCATCACATCGTTGATCCACATCACAGAGATTCAACAACCTTCATCTTTTATCTGTGCTTAAGACCGACTATAT ATGGCATCAAGCACACATGGACAAGTTTTATATGATGCAGTAACCTTCATACCAAATTTGTCACAATGAGTTTATATGTTATAGGTTCACATAACATCGG AATTGCGATGGCGACTCCATTGGGTCTAGTTGTACCAAACATAAAGAATGTCCAGTCTCTTTCCATCTTGGAGATAACCAAAGAGTTGGCAAGGTTGCAA CAAATGGCTTCAGATAACAAGTTAAGTTCTGAGGATATATGTGGTGGGACAATTACCTTAAGCAACATTGGAGCAATTGGTGGAAAGTTTGGTTCCCCAC TTCTCAATCTTCCCCAAGTTTCCATTATTGCCATTGGTCGAACTCAGAAAGTTCCACAGTTTGCAGATGATGGAACCGTGTACCCAATATCAATCATGAC TGTTAATATTGGTGCAGATCATAGAGTCTTGGATGGAGCAACAGTTGCAAGATTTTGCAATGAGTGGAAACAGTTCATTCAAAATCCAGAGCTCCTACTC TTACATTTGAGATGAAATTTGTTGTATTATTAATCTTTTATTCACCACAATATCAACATTCATCTCATCCAAACTACTTATATATATATATATATATATA TATATATATAGATAGATACATTCATGAGAATAAAATATTTACTTATATAAGTA BLAST |
Tissue | flowers |
Gene name | LI_gene_37503; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23323
Blastp | Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial from Arabidopsis with 49.22% of identity |
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Blastx | Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial from Arabidopsis with 49.74% of identity |
Eggnog | Dehydrogenase(COG0508) |
Kegg | Link to kegg annotations (AT3G06850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451077.1) |
Pfam | Biotin-requiring enzyme (PF00364.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |