| Id Trinity | FTRINITY_DN53865_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_23405 |
| Sequence | CCGATCCGTGCCACTCTTTTCCCTGGAGATGGTATTGGCCCCGAGATCTCCGAATCCGTTAAACAGGTTTCGTTTTTTCATTTTCTCGCTTTTCGATTTA TCTGTGCGGATAAGACTGCGTACATCTACCTCCCCGTATTCTGGGAGCTCATGCAATGAGCCGTGCTTTTTTAATTGGTTGTTTTCTTTTTTGTCTGATC TTAGTGTATATGTAACTTTATCAGCTGAATATGTTTTCTGAATGTTAAAAATATGTAGAAAATGATGCATCCTCTTATTCTTTTAAAAATAGCTTGTACT TTCAATATCAAATAGTGTTGCTTTAAAAAACTAAGGTAAATGGACATGCTTAATTTGATTCGAAAGTTGGAAAAAAATGGGACCTATTTATCAGTTCATA ATTTTCATGGAAATAGATAATTATATGTGATGTCAAGTATTTAGCATGTCTTGTGTTCATCCATTTGAGAGGAGCTACAGTTCCCTTCAGTCTGTATGGT AAATTGCGTTCACGGTTGCGGTTATGCCACGATTATCACAATTGCGTGAAAACACAGTCCTGGTTCCAGTTGCATAATTGTGCGGAAACTCCAACAAGGC TGCAACAGTAATATTGCAACCGCAATTTGAAACCATTTGGTTTTTTTCTATGTTAATAGAAAGGTGTAGCAGCATAGCTATGTCTTGTGTAATGTGCTGG TGTTGGCATGTATTGGTTGTGGATCAATCTGATTGAACATCTAAACTTTAAAAATGGGTATGGGTTGTTTATTTTGTTTGGCCTATGTAATTGCCGATGA AAAACTTTTTCATTAGAGTTGACGAATATATTAATAACTCAAGTTTTATCATTTTTTGGGGCTGTTTGTTCTCCAGTGATGTAAGCTATACTTGAAATAG CTCTTGTATAATATCTATCGTTTTGGATAGACAGAAAGTGTGTGGTGAATTAGGAAATAGTAAAAACTTGATCTGTTGTTTAGTTGTATTTTCCAAACTG TGTGTTAGTTTTTATTACTACAGACAAACACAGACATATTTGTTTTACTAAAAAAAGTGTGAGTACTTAGAAATTGATGCGCCGGGATGCATTTTTCTGA AGTTGAAATGAGTGACATTTGCAATTGATTTAATTTAATATTATTTATTTCTCTTATAAAACTTAATTTATTTTGTGCTAGGTAAAAAATGTTGTTTTCT TAGGATATTCTTTGTTTGAATGCATCGGCAAGGGGGCTCAATGAAGCCCTTGTTCCCAATAACTTCAAGTGCTTGCTTTGTCTATCTCTTGGTTTCTACT TGTTTCTTTATATTAAGAGTATATTGGCTTGTTTTACAGTACTTTTACTTTTTCTACTTTGCCATGGCTGTATAATCTATTTGTGCTCTCCATTTCGTTG TTGCCGAAACTGATCAAATTTGCTATACCGTATTCTTCCTCATCTTTCTTTGCTATATATGTTTCTTGACTTCTTTTTATGTATACTCTAAAATTCATAG AGATTTACTGTTATTGTTGCATCAAAATTTAACACTTTCTCAATTATTACTATTACAATAATTAGATATTCCAAGCAGCTGAAGTGCCAATAGAATGGGA AGAGCATTATGTAGGGACAGAAATTGACCCTAGAACACAGAGCTTTCTAACATGGGAAAGTTTGGAATCAGTAAGGCGCAACAAGGTTGGCTTGAAAGGG CCAATGGCCACCCCTATTGGAAAAGGGCATCGTTCTTTAAACCTTACTCTAAGAAAAGAACTTAGTTTGTATGCCAATGTTCGACCGTGCTACAGCCTTC CTGGCTACAAAACTCGGTATGATAATGTGAATCTCATCACGATCCGTGAAAATACCGAAGGGGAGTACAGTGGACTTGAACATCAGGTTGTGAGAGGTGT AGTAGAAAGTCTCAAAATCATTACTCGTCATGCAAGTTTAAGGGTGGCTGAGTATGCCTTTCACTATGCCAAGGTACACGGGAGAGAGAGGGTATCTGCT ATCCACAAAGCAAACATTATGCAAAAGACTGATGGACTTTTCCTCAAGTGTTGCCGTGAGGTTGCAGAGAAGTATCCTGAGATAAAATATGAGGAAGTTG TCATTGACAATTGCTGCATGATGCTTGTAAAGAATCCTGCACTTTTTGATGTATTGGTGATGCCTAACCTTTATGGTGATATTATCAGTGACCTCTGTGC TGGCTTGATTGGGGGTTTGGGCTTGACACCAAGCTGCAACATTGGTGAGGGAGGTATTGCACTTGCTGAGGCTGTACACGGTTCAGCGCCTGATATTGCT GGAAAGAATTTGGCAAATCCAACTGCTTTGCTGCTTAGTGGTGTTACAATGTTGCGCCATTTGGATCTCCATGACAAAGCAGACCGAATTCAAAATGCCA TCCTCAATACAATTGCTGAAGGGAAGTACCGAACTGCTGATCTTGGTGGCAGTTCAAAGACAACCGAATTTACTGCAGCAATTATTGATCATCTTTAAAT TTTGCTTTGGAGTTAGCAAGAATTTGTTGCTTATGATTTTGTTCAGTTAATTTCCTATTTTTCCCCACTTTTTCCAGAGGAGTAAGATTACCTCAGCTTA ATGGAAAATTCATATAAGTTTGTTGACCCTGCAACGAAATACAAGTAATGTTCAAGCATTCAAGTATTCACTGCCCAATGCAGTTTTAGGGCATTGTGAG GGGATGGAGTCTTTACACTTGAAAATGCTTCTTCATGGATAACCCTCAATAGTCCATTTTAGTATTCTTTGTTGGTAATATTAGCTAAATAAAAGTAACT TCTGATGTTTCATTTTTTCATCATTAATGCCTTTGGTGACTTGTTCAGATTGCATGCTTAATTTAGTTTTAAAAATGTGTTTAACTTGTGTTCTGACTAA GAATTGTTAAGGGACTAAAATAGTTCAAACATGCCATTCACGGGTTTTGTGCTACAGTTTTAATAGTATCAAAGGCTTTGGATCATTGGTTACTGTCTAC ACAAAGTGAAAAATGCCCATGTTTCTGTTTGGACCAATAGTAATTGTATGTGGCATGACAATGTTGGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37515; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23405
| Blastp | Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial from Arabidopsis with 90.91% of identity |
|---|---|
| Blastx | Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial from Arabidopsis with 90.97% of identity |
| Eggnog | 3-isopropylmalate dehydrogenase activity(COG0473) |
| Kegg | Link to kegg annotations (AT5G03290) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435274.1) |
| Pfam | Isocitrate/isopropylmalate dehydrogenase (PF00180.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |