| Id Trinity | FTRINITY_DN53871_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_25620 |
| Sequence | CTTGATTTCATTGATCTGTTTTTTTTTTTTTTTTTTTATTTCATTCTCTCGTAAATAAGGTTGTATGAGAAATGGAAGTAGTTTGGGCCGATCCAACATA AAAGGGCAGATGTTAGAACGGGATGGGTCGAGAAGGTTCTGGAAGCAAAGCAAACCCCTTCTAAAACCCTACTTCGTTATAACTTCATCATTTCATCATT TCATCAATTCATCAATCATGCACAGACTCTCTAGGCGTTGCTCCTCCCTCTCCGCCCTCCTCCGCCACGCCACTCCACTCCGCCGACCACTCTCTTCTTC TCACATCGCTTCGGTTGCTGATAATGACACCAATTCTAGGTGCTATTCCGTGTTAGCCTCAGAGAAATCCACAAATAAGGTAGAGTTGAGAAGGGATCTG TTTTTAGGAAAGCGATATGAATCAACTGCTGCAGAATCTTCTTCCTCCAATTCCCCACCAGCCGAGAGATACGAGTACCAAGCCGAGGTTAGTCGCCTCA TGGACCTCATTGTTAACAGTTTATACAGTAACAAGGAAGTGTTTCTTAGGGAGCTTATCAGCAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTAAG TGTCACAGAGCCTGAACTAATGAAGGAAACACTTGATTTTGATATCCGGATTCAGACAGATAAAGATAATGGGATTATCACAATTACTGATTCAGGCATC GGTATGACCAGGCAAGAGCTTGTTGATTGTCTTGGTACTATTGCTCAGAGTGGAACTGCGAAGTTTTTGAAGGCTCTAAAGGATAGCAAGGATGCTGGGG GTGACAACAACTTAATTGGTCAATTCGGTGTGGGATTTTATTCTGCTTTTCTGGTTGCTGATCGGGTGGTTGTCTCAACCAAGAGTCCAAAATCTGATAA ACAATATGTTTGGGATGGAGAGGCAAATGATAGCTCATATACTATTTCTGAGGAGACAGATCCTGAGAAGTTGATTCCAAGAGGAACCCGCCTTACTCTG CATCTGAAGAGGGATGCCAAAGATTTTGCTCATCCAGAGCGGATTCAAAAGCTTGTGAAAAACTATTCACAATTTGTCTCATTCCCAATATACACTTGGC AGGAAAAGGGATACACAAAAGAAGTGGAGGTTGATGAGGATCCAGCTGAAGCCAAGACGGATAACCAAGATGACAAGACTGAGAAGAAGAGGAAAACTAA GACTGTTGTTGAGCGTTATTGGGATTGGGAGCTAACAAATGAGACCCAACCAATCTGGCTTCGTAATCCGAAAGAAGTCACTAAGGAGGACTACAATGAG TTTTACAAGAATACCTTTAATGAATACCTGGAGCCTTTAGCGTCGTCACACTTTACCACAGAGGGTGAGGTAGAATTTAGGTCTGTACTTTATGTGCCTG CTATTGCTCCTTCAGGGAAGGATGACATAATCAATCCCAAGACCAAGAATATAAGACTTCATGTGAAGAGAGTGTTCATTTCAGATGACTTCGATGGAGA ACTGTTCCCTCGATACTTAAGCTTTGTCAAGGGTGTGGTTGACTCTAATGATCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTG CGGATTATGAGGAAACGGTTAGTTCGAAAGGCTTTTGACATGATTCTGGGGATATCCATGAGCGATAACAGAGGGGTATTTTCTTAACTTATTCAGAATA TTATTTGGTTACCAGAGAGAGGAGAAAAACATAAGTTTTGTTTAAAATTTGTAACTTCTCTTGTTAATGTGTCCTGACTATGTATTGCATGGAGTGAAGG CTTGCTTCACAAGTTCTTACTTGTATAAATGAGATGAAGTAATATAAATGAACACAAATGGCTATAGATACATAATGATTAATTTGTATATAGTTTACCA ATTTTGCCTATTAAATTATAGAAATATGATAGCTTAAGGTGGCTTCATTTCAGATACCTTTAAGTTGTATGTAGTTTACTCATTTGTTTTTATTACCTTT CTATATTACTTATCTTTATGGAAAGGATGACAAGTTTCCCATTTGTTTTACCATATGCTGTGTTCGGTATGCAGGACTATGAGGCGTTCTATGATAACTT TGGCAAACACTTGAAACTGGGTTGTATTGAAGACCGTGAAAATCACAAACGCATTGCTCCTTTGCTCCGATTTTTATCATCCCAAAGCGAGGAAGAACTG ATCAGCTTAGACGAATATGTTGAGAATATGAAACCTGATCAAAAGGATATTTATTACATTGCCTCTGACAGCGTGACTAGTGCAAAGAACACACCTTTCT TGGAGAGACTTGCGGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGACCCAATAGATGAGGTTGCCATTCAAAGCCTTAAGTCATACAAGGAAAAGAATTT TGTTGACATTAGCAAGGAAGACCTGGATATAGGTGAAAAGAACGAGGAAAAGGATAAGGAGATAAAGCAGGAATTTAGCCAAACTTGTGATTGGATTAAG AAACGTTTGGGAGGTAAAGTTGCAAATGTGCAAATTTCAAACCGACTTAGCTCCTCACCTTGTGTTCTGGTGTCAGGAAAATTTGGTTGGTCTGCAAACA TGGAAAGGTTAATGAAGGCACAAACTATGGGTGACCCCAACAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTTGAGGTCAACCCTAACCACCCTATTAT CCGCAACTTGGATGCTGCATGCAAAACAAACCCCGATGACGAGGATGCCCTCAGAGCTATTGATCTTTTGTATGATGCAGCTTTGGTTTCCAGTGGTTTC ACGGTAAAGCTCATTCATGGTTTAATATTCAACCGTTTTTAAGTCATTCAAGTTTCTTTGTGATATTAGACTCTGCTTGTATTTGGCATGCCAAGCTTGT AGTTTTATTTGATAGATTGTCACTGTAGCTTGTCACTAACTCGGCCAATAAACTTATGGAGCTATTGGTGAACTATACAAATGGAGATTGCATCTTTCTA AAGCTTGTTGCTACAAGCTCTTCCAATCACATTTTCGCTCTTTACAGTCTTTACCACAAGCCAATATAAATTTGTCCCTTCAACTCATTTAATAAATTTT AGCTAGTTGCACAACTAGCTATATAGTTATGAGCTTTTTGATATAATCTCATAGCAGCATTCAACTAGCTATAGTATCTGGCCTTTGGCCTTGTACCATA CCTGGGATCTAGTGGATCTTAACCAAAGGATCAACTCCTTGTTGGCTGGTTTATATTCTCTATTTTTGATGACATGGAATTATGGTGCACAAATGTTCCA TGCGCTAGTTAATTTTAGCACTCAGTTTTCTGAACATGCATCTTTAGACTAAATTTGTTTGTTTGTTTGTTTGGTATGCAGCCTGATAATCCAGCACAGC TTGGAGGAAAGATATATGAGATGATGGGTTTGGCTCTTGGTGGTAAATGGTCAATTCCTAATCAGTCCCAGCCACAGCCACAGCCACAGCCACATCATGT CCCAGAAACTGTAGAAGCTGAGGTGGTTGAATCTACTGAAGCTGGTTCTAACAAGTGAGAAGGGATTATTATTGAAAGATTTTTTTGTTTCCCCGATAGA GTTTTCTACGTTTCAATGCCTGGTTATTGGCCAAACTTGTTTTTGATGAACATTTCCAATGGGTGATAATGGATCATTTTCATGTAGTATGGTATAAAGT AATTAAGATATCCACTATTTGACATTTGAGTAGTTTTTAATTTATTTCGAAAAGGTTTCTTCATATTATTTGGACTCATTGTATTTTGGAGAGGTTTCTT CATATGATTTTGGATTCATTGTACTCCCTTCCCTCAATTCTATGTCTTAATTGTGATATTCCATTCAGACCCATATAAAATATATTTGATAATTTTGAAG GTGATAAAGTAGATAAAATGAGAAAGTGTTTTATTCTTTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37542; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_25620
| Blastp | Heat shock protein 90-6, mitochondrial from Arabidopsis with 77.15% of identity |
|---|---|
| Blastx | Heat shock protein 90-6, mitochondrial from Arabidopsis with 80.65% of identity |
| Eggnog | Molecular chaperone. Has ATPase activity (By similarity)(COG0326) |
| Kegg | Link to kegg annotations (AT3G07770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435734.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF13589.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |