| Id Trinity | FTRINITY_DN53878_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_24798 |
| Sequence | CTCCTTTCTTTCCCTGGCTCGTTTGCTTCTTTCTTTCCTCATTCGTGCATCTAGGATAGGAGAGCAGCAGCTACTTCTTGACTTTCAACCTACGACCGAA GTAAAGTCCTTGACTGGACTGACCGCACTGATTGGATTGCTTTCTTAGTGTGGTTTGAAACTCTTTTTGTTCGCTGTCCACTGGTGATATTTACATATAT AAATGTAGATAGAGAAAGAGGCTAAGCTAAGCCTACGTAACGCTACGGGAACTGCTTTTTTTGTCCGCTTATGCTATATAGATAGATGCGCTACCTTGTG AAAGAAAACATCATTTGTAAGTCAATCTAGAATCCAGAGCAGCTAAGAAAAGAAAATCGAGTAGCTTGCGGGCCGGTCGTCATTGCACACTAGCTGGTCA GTGTGGGTAAAAGAGTGTTCCGTTGGTGTTCTCAGAAAAAGGACCTTGCTTGTTCCCAAAATTCCCATGTCTTTCTTGATTGGTAAACCCAACCAGCGAT TTACAACAAACAAGTCTTTCCTCTTGTTGGGGGGAGCAGAGCAGTTAAAGAACCAAAGCAAATGAAAAGCAAATGGCTATTCCTCACGATTGCTCCTTGT GATGCAGCGGAACCATGGCAATTAGGATTTCAAGACGCAGCAACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTAATTC TGATTTTGGTTTTCGTATTATGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATAAAAAAAATCTAATCCCGCAAAGGATTGTTCATGGAACTACTAT CGAGATTCTTTGGACCATCTTTCCTAGTATCATCCTGATGTTCATTGCTATACCATCATTTGCTCTGTTATACTCAATGGACGAGGTAGTAGTAGATCCA GCCATTACTATCAAAGCTATTGGACATCAATGGTATTGGACTTATGAGTATTCAGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATA TGATTCCAGAAGATGATCTAGAATTGGGTCAATTACGTTTATTAGAAGTGGACAATAGAGTTCTTGTACCAGCCAAAAGTCATATACGTATTATTGTAAC ATCTGCTGATGTACTTCATAGTTGGGCTGTACCTTCCTTAGGTGTCAAATGTGATGCTGTACCTGGTCGTTTAAATCAGATCTCTATTTTGGTACAACGA GAAGGGGTTTACTATGGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTATGCCTATCGTCGTAGAAGCAGTTTCTAGTAAAGATTATGGTTCTT GGGTATCCAATCAATTAATCCCATAAACAACAGGGGAAGCTTCCGCGGAAATTAAAGAGTAGGGTGAGGGATAAGGGGGGAAGCCATAAAATAAAATGGA AGGCTTCGCTCGCTCTAACGCTCGTTTAGTAGACAGCGAGTGGAGTGCATAAGCCCCTTTAGAGAGAGAAGAGATAGGGGCGAGTACTACACGAGCTCGT AAGTCAAGTACGGAACGAGCGAAGGAGAGCGACCTCATCTTGCTTGCTTCTGGCGAAGCTTCTAGAAGGCCCACCACTTCACTTCATAGGAGCGATAGCG AAGCCGTATAAAGGCAAAGAGCTCGTATAGCTCGCAATAGCGAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_37621; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_24798
| Blastp | Cytochrome c oxidase subunit 2 from Arabidopsis with 96.02% of identity |
|---|---|
| Blastx | Cytochrome c oxidase subunit 2 from Arabidopsis with 95.33% of identity |
| Eggnog | Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (By similarity)(COG1622) |
| Kegg | Link to kegg annotations (ArthMp015) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020235101.1) |
| Pfam | Cytochrome C oxidase subunit II, transmembrane domain (PF02790.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |