Ll_transcript_90073

• Id Trinity: FTRINITY_DN53900_c7_g6_i2
• Name Transcript: Ll_transcript_90073
• Sequence: CTAAACCTAGTTCCATATTATTAAAACAAACAATAATTTCCTCTCCTTATTATGAACCTAACCCCACACAGGTTAACACTTCTGCAAAAGTGAGTAGTAT CCATGGCACAGTAAGAACACTCAAAGAGTGAGTGAAACTGTGGAGCATTGTTGAGAGCAACAAAACTTGCACTAACTCAACACTCACCAACCCTTTTCTT CAATCAACAATGCTCCAAAAAACCTGCATTTTACTTATATTCTCTGTTTTTGGTTACTTTTTACCACTTGGAACATCAATGCTGAACTTAACTCTTCCAG GAACACACCCTGACCCTGAAGCTGTTGCTCATGAAGTTCATAGGAAGATAAATGCTTCAATCACAAGAAGAGAAATGCTAGCATTATCACAGAAAGATGA ATCATCATGCCTAACAGGTAACCCAATTGATGATTGTTGGAAATGTGACCCAGATTGGCCCAACAACCGTCAAAGGCTAGCAGATTGTGCCATTGGGTTT GGCCAATATGCAAAAGGAGGAAAGGGTGGTGAATTTTACATTGTTACTGATTCATCTGATAATGATGCTGTTAACCCAAAACCAGGAACACTTAGATATG CAGTGATACAAAATGAGCCACTTTGGATAGTGTTCCCAAGTAACATGATGATTAAGCTTTCTCAAGAGTTGATTTTTAATAGCTATAAGACCCTTGATGG ACGTGGTGCTGATGTGCACATTGTGGGTGGAGGATGCATTACTCTTCAGTTTATAAGCAATGTCATTATACATAATATTCATATCCATCATTGTCATCCC TCGGGGAACACAAACGTGCGGTCAAGCCCAGAGCACTATGGGTATCGCACAGAATCAGATGGTGATGGTATATCAATATTTGGATCAAAGGATTTATGGA TTGACCATTGCACCCTTTCACGTTGCAAAGATGGGTTGATAGATGCAATTATGGGTTCCACAGGGATCACTATATCAAACAACTTCTTCTCTCATCACAA TGAAGTTATGCTACTTGGCCATAGTGACCATTACACTCCTGACTCAGGCATGCAAGTTACTATTGCCTTCAATCACTTTGGGGAAGAACTCGTGCAGCGC ATGCCAAGGTGCAGGAGGGGTTACATCCACGTAGTTAACAATGATTTTACCCGATGGGAGATGTATGCTATTGGTGGCAGTGGAGAACCCACCATCAACA GCCAAGGGAACCGTTACATGGCTCCAACTAACCCTTTTGCTAAGGAAGTTACTAAGAGGGTTGATACTGAGGAAGGAATGTGGAAGGGGTGGAATTGGAG GTCTGAGGGTGATATCATGGTTAATGGAGCCTTCTTTGTAGCTTCTGGTGAAGAGGTTGAGGTTAAGTATGAGAAAGCTTATAGCGTCGAGCCTAAATCG GCCGATCGAATAAGTATACTCACCATGTCCGCCGGTGTTCTTGGCGTTGCCAGGGACAACAACCTTGGAATGTGGAGCAGAGGACCCAATGGTGAAGGTG ATGACATAACATATTCAGGAGGAGTTGATTACTCAGATGAAATGTCCCTTAGTGCAAGGGTTGTTATACCACCTTTGCTTACTTTCACTATTCTTCTTTC ATCTTTTCTATTGTTGTGTTTTGTGTCTTATAGAATACCATTAGTTGTTATTCTATAACACTTAACAATTCAAGAACCGTGCGTCTTCAATGTATTGTGG CGCTGTTTCTTTTTTCATTGGAATGAAAAGGGTCTGGTCCTAAAGTTAAAGGTCAGGCACCATTTAAGACTGTATATATATTTTTCACCTTCATCATTGA ACTCTTTTTTAATGTGCTTTGTTGAGTTCCTTC
• Tissue: flowers
• Gene name: LI_gene_37846;
• Additional information: details;

Expression of Ll_transcript_90073

FPKM

• FPAB: 0.4
• FPNAB: 6.7
• LF1: 6.7
• LF2: 5.4
• LF3: 12
• LF4: 14.9
• UF1: 5
• UF2: 5.8
• UF3: 11.4
• UF4: 13.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_90073

• Blastp: Probable pectate lyase 12 from Arabidopsis with 74.27% of identity
• Blastx: Probable pectate lyase 12 from Arabidopsis with 77.78% of identity
• Eggnog: pectate lyase activity(COG3866)
• Kegg: Link to kegg annotations (AT3G53190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425862.1)
• Pfam: Pectate lyase (PF00544.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;