Id Trinity | FTRINITY_DN53919_c3_g1_i1 |
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Name Transcript | Ll_transcript_89768 |
Sequence | ACAAAAATATATGGTTCACCGTCTTTGAGGATGCCAGTAAATAAGTAAGATGAAGAAATAGACTAGGCGTAACCCCAAACAAAGGCAGCAAGAGACAGAG AAAGAGTGACCTGAAATATTAACTATAAGCATCTTATATTTTATCTTATATATGAGTCTTTTGGTTTTATCAGAAATGAAATCAAGCAAACGTGAAACCA GATCACGAGTTGGAAGTTCTTGCATTAGTATATTTTTCATTTTCAGGCTTTAAATATTTTTGGTTCGATTCAAGTTTTCGTTTATGGCTTTTTCTTGTCT TTTGGCATAGTTAGCCAGAGTCTCTTTAAAGAATTTGGGTAGCCTCCAAAAGAATTTTAAGTTCACTTCTTGGCTTTTGCTACTCCAAAACCATTGTTTT CTTCCTTGTGTTGTACCATCTGAAACCGTTTGAAACTTTGCTGTTTGCTTGTGCTCGCTTCTTTTGTTAGCTACAATCACTCCAATATAACTCCATCACC TTTTTCCAATACTCAAATGATGCAAGGTTACCCCTTCTCCCTATCCACCACTTCTTCCATTGGAGGGTTTTCTCCAGAGCAAAACACAAACCCTAACCCT AAACCTAATCAACCTCCTCTCCCCAAGAAGAAGAGAAATCTACCAGGAACACCAGATCCAGATGCTGAGGTCATTGCTCTTTCTCCGAAGACCCTTATGG CCACTAACAGATTCATATGTGAAATATGTAACAAAGGGTTTCAGAGAGACCAAAATCTTCAACTTCATAGAAGGGGTCACAACCTTCCATGGAAGCTACG TCAGAGGTCCAACAAGGAGGTGAGGAAGAAGGTCTACATCTGCCCGGAGAAGACCTGCGTCCACCACGACCCATCGCGGGCGCTCGGCGACCTCACCGGG ATAAAGAAGCACTTCAGCAGAAAGCATGGTGAGAAGAAATGGAAATGTGATAAATGTTCAAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCAA AGACATGTGGCACAAGAGAGTACAGATGTGACTGTGGAACCCTCTTCTCAAGGAGGGACAGTTTCATAACCCATAGAGCCTTCTGTGATGCATTGGCTGA GGAGAGTGCGAGAGAAGGCATACCCAACCAACACCATTCATCACTTCTTCAACCCTCTCATCACATTAATCTCCAAACACATGATCAAGACAATAATATT CATGCTACTAATAATAATATTTTCCCTTTGAAAAAAGAGCAACAAAGTTTTAGCCTCATAAGTCCACAAATAATGCCCCCATGGCTTGGCCCACAAAGTC ACAACAACCCTCTTCATCTCTCTTCCACCTCATCAATCTTTTCCCATCATCAACAACATCATCATCAAGATCTAAGCAACCTCCATGAAACTCCAAACCC TAACCCTAGTAGTCTTGGATCCACTCATCTTCTTCCAGCTGTGCCTCTTTCTTCCCCAAACATGTCAGCTACAGCTTTGCTTCAGAAAGCAGCTCAAATG GGTGCAACCATGAGCAAGCTTTGTTCCTCACAGTCACAACCCATTATGAGGCCCCACATGCAGCCTCACGTGTCATCTTCTAGCAATGGCAACAATGACA ACATTTCCAACAGTGGTAGTAACAACAACTTTGGTTTGAACTTGTCCTCTCGTGAAGATCACGTGACTACTACCACCACCGCCACTGCCACAGGAGTTTC TCAATCATCTTTTCTTCATCATGTTATGTTTGAAGGAACTTCTTTTGAGGATGCTTTTGGTGGTATACT BLAST |
Tissue | flowers |
Gene name | LI_gene_38063; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_89768
Blastp | Protein indeterminate-domain 2 from Arabidopsis with 53.87% of identity |
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Blastx | Protein indeterminate-domain 2 from Arabidopsis with 90.38% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT3G50700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458609.1) |
Pfam | C2H2-type zinc finger (PF13912.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |