Ll_transcript_90007

• Id Trinity: FTRINITY_DN53946_c0_g1_i4
• Name Transcript: Ll_transcript_90007
• Sequence: ACTATATAAGCCTTGATCTTATTTATCTAGTTTGGTAAAGTAGCGTAGACGACGAACCGAAACGAAATTTCCAACCTTCATTCCAAAATTTTCATGTCCA TCTTGCCCTCACAAACCCAAACAGCACCTTCATCTTCATCATCTTCATCTTCTTCAAACCCTAATTCCCAACATGGATTTTCAATCCCTTCTTCTTCCTC CATCCTCGACCTTCCTCTCGGATCCCTCCAGATCCACGATTCCCATATTCCAGGTCCATCAATTCCTGCTGCAGAAGATTCTGGTGGAACTTCCGAAAAG GTGACAGAATATGGGTCTCCAAGTGGTTTGGAGGCTTCATCTCAGCAAAACTCTAGAACACGTTCTAGGAGTCACTCAGGAAGACGAACGTCTGGATCAT CTCAATCAGTGGGGAACACAACAGGAACAACTTCTTCTCAAAGAAGTCAACAGACTCTTGGGTCTGTAAATTCTCATGGAAACTCACCTTTGGCAGGAAG GAAGTCTCAGATGGTGAATGGTAATTACTTGCTGAATTTTCAATATGATCCAATATCTCGTTCTCAGCCAAGGGGTCCTCCTCCTCCTCCACCCAGAAGG CAGCGAAAGAGAAAACCATACAACAAAGATTTGTTTTTGCAGGCAAATTACAAATTCATGGTGCTAGATTCAGGAAATTATTCAGCTGAGTCTATGGATC CAGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACTTATTCGACCCCCCTTCCAATTCAGTGTCCAATTTGTTTGGAGTATCCCCTCTGTCCACA AATAACCTCGTGTGGACATATTTTCTGTTTCCCATGTATTCTACAATACCTATTATTGGGTGAAGAGGATAACAAAGGTGAATGCTGGAAAAGGTGTCCT TTATGCTTTGTGATGGTATCTGTCAAAGATTTATATACCGTACACATATCAAATGTCAAACAGTATCAAGTAGGAGATAATATTGAGTTCACATTTTTAA CTCGAAAAAAGGATTCATTTACTCTGTCCCATAAAAATAAACAAGAGACAGATACGACATCATGTGGCAATGAAGATTTTTGTGATCCCTTTTCTAAGTT TACACTCACATCAGATGTAGACCTTTCAGTGAGACATGCAATCTCAGATCTAGATGGTTGGCTGGCCAGGGCTGATTCAGGTCTTGTTGATGACCTAGAG AAGCTTCCTTATGTTTGTGCTGCAATGCAGCAATTAAAGCAGAGAAAGAAGTATTGGAACGAGCACAGAGCTTGTGACAGTGAAAAATCTTCTAGGCTTA TTGATTATGGGCATCAGATACCATCAGCAGCTGTAAGTTTTATTGACACTGATGATGAAACCCATTCTAATGGATCAAGAACTTCCTCTACAGATTTCCA TGATCGAAGTAAGGGCATAATATTGGATAAACCAATTGCTGGGACCTCTCCGGATCAAATTTCGGATGTGGAGAAAGTTTTACCAGATCAGGAAATGAAT TTATCTTCATATGAGGAGAAAAATAGTATCCGAAGGCTTTCAAATGGTAGTGGAGATGTTAAGGAAGGTGACTCATACAATTTCTACCAGGTAATTGATG ACAATTGGTTTGTGTTATGTTTTTCTACACCCGTCTTGCCTGATATTTTCCTAATTGGATAGAGCAATTGTGTCATCATATGAACTATGCGCAATAATTT GACACTGTTTACACCAAAATGGGTATGAACTATATATAGAGAATTTAATGGAAATACGTGAAATAAGATGAAAGGATGAAAGGTTGTGCTATGTTTGAAT GATTAAGAAGGGAGGAAACAGAGAAGTGTTATGTGTTAAATTCCAATATGACCCTTAGAGATGTTTCTCAAGAAGCTGAATTATATTTTTCATTTTATTT TTTTGGACAAAATAAATGTATTAGGCTGAACACAAAGAAGGACAAGGGATGCTAATTGCAAAATAAAATGAATAGGGGATAAAGAGAACTAAAAAAATCA ATGAAGCAAAGCTATCCAATCTCTCAACATTTATGTAAGAAAAAAACCCTTTTAAGAAGACCATGGACTTTAAATAGTAAATGGCAAGTTTTTAAAACAA AACAATACAATACATTATCCCTCATTATCCTTCAATTTTTAAGGGAACACAGAGAGAGAGTTGGAGGGATAGTGGCAGTCCCTTCCCTTTTCCATTGATC CTAACTAGGGATCTCGTTTTTTTCTATCCGCTTTGCTTTCATTCCTCATTACATCTCCTAACAAACTCTTGAGGAAAATCAGAATGAATATCTGATTAAG AAAGCAGGACGCAGCATGTTATTCAAAGAAGTAAAACATAGTACAATAGTACTTCTTCAGCATTCCATATTTTTCGTGCATCTGCTCCCTTCCGTTGTAA CTGATTTTCTTAATTTCTTGTACGCAATGGTTGTTTCAAAACATTACTATTATTTTAGGAGGAATTAGCTAAGTGTCAAGATTTTGTTAAGGCTACACCA AATACTGTATTTGGATTATTGACCACTTAACCTGCATGACGGCTTTTAGTTATTTACCAAATTTTTAATCACAAGTGGAAAATTTGAGCTGATTCTATAT TATATTATTATCTTTGTGCACCAACAGTTGGAAGAGGTTGAGGTACGTGCAATGTGCATTATTTTTCGGATTAAATGCACATTATGTCTTTATTATTATT GTTAGTGGCATTCTGAAGATGTAGTATTGTACTATGTTTTACTAAGATTGAATGGTTTACTTATGCTGCTGTCTTCCAATTGTATCAGTGGATGCTGATA AATTTGTGGCTTGGTTATCCTCACTGACAACATGTTGCTTTTGAACTTGAATTACCCATTGGTTTTAAATCACGTCTATCTATTTTAAACTCATTTATGG ATTAGTCCCTCATGATTGTTATATGGGATATGGGATGCTGCTTTTAATTTTATTGGACAAATCTTGAATTCTTGATGCTTAAAAAATTTCTAATTATTTC CCCTTTACTGTTGACTTTTGGTTGTTACAATGCTCATGTCTATTTCAGGCTTGTGATGGTCAGCATGTAATTCTTCATACATTGAACATGAAAGTTTTAC TTCACCATTATGGGAGCTATGATAAGCTTCCACACAGAATAAGTGGAAGGATTCTGCAATTGGAGGCAGTTACTCAGTCCGAGGCCATGAGGAGGCGATA TCGATTCATAAGCCATTTTCCGTTAACAACAACATTTCAGCTTTGTGAAATTGATTTGAGTGATATACTGCCTCCTGAAGCACTGGCCCCATTTATGGAT GAAATAAAGAAGCGTGCAAATCAGAGGAAGCAGCTTGCAAAGAAGGAACTAAAGGAAAAAATCAAGGCTGAAGCTGCTTCTACTTATTCTGTTACCATAC CAACAAGTTATCAGTTTGCTTCTCGTGATAATCCTCCTGTGTTCTCGATGGATGACTTTGGAGCTTTGGGAAATTCCGCTACGTCATCAAGTCCTCCAGT TGTCGGGGAGAGAAAATTGTTCTCAAATGTTACAAGGCTTGGCTTTGCTGCTGCTCATGATTCTCCTTCCCTTCAAATTCAAGAGACTGGAGGATCACAT GATAACAATACAACCACTGGGTCTTCTAGTGCAACAGGTTTGAGAAATGTGGAGGCACCATCATATTCCAATGTTACATCCAGAGCAGAATCTAATATAA GCTTGAATGCACCGAAGACAAACGACGCAGGGAAGAGGGGAAAGAAACCAAATCGAGTTCTTCTCTCAACAGCTGGTGGCAGGCGCTATTGAAGACTCGG TCACAGTCTCTTGGTAAGATGACTCCCAACCTCACCCCACCCTATACCAAGCCAAATAAACAATTCCTACCTCTTTGAAGTGATTTCAGTGTGTAGTAAT CAACCTTTAATAGATGATATGTGTGTACTTCATGCTCCTCTTATTAACAGGCAGACATGTGAAGAGAGAATAAATGTTTAAGTATACACAATCTCTGTCA ATCCATGACAATTTAGGTTCAGTTGAATATTTACGTGGGTTTGTTGTTGACTACTTATTACGGTATGAGTAGAAATGAGTCGAGTCGAGTCAGACACTTG AAGTTCATACTTATCCATGCATGAGAAGATTAGGTAAATGAGTCGAGTCGAGTCAGACACTTGAAGTTCATACTTACTGCATGAGAAGAATAGGTAAATG AGTCGAGTCGAGTCAGACACGTGAAGTTCATACTTAATGCATGA
• Tissue: flowers
• Gene name: LI_gene_38271;
• Additional information: details;

Expression of Ll_transcript_90007

FPKM

• FPAB: 12.8
• FPNAB: 10.1
• LF1: 8.8
• LF2: 8.2
• LF3: 10.3
• LF4: 10.9
• UF1: 8.1
• UF2: 9.2
• UF3: 12.2
• UF4: 13.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_90007

• Blastp: RING finger protein 10 from Xenopus with 40.11% of identity
• Blastx: RING finger protein 10 from Xenopus with 37.78% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (734904)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447408.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF00097.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;