| Id Trinity | FTRINITY_DN53949_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_89429 |
| Sequence | AGAGAAGATCCGCAACTTTCGTTATTCTTATTGTTGAATGGAGCACGTTCCTTTGTTTCTCCCTTAACCACTCTTTCTTCACATTCTCTCTCTAACTATA ACTATCTCTATTTCCTTCAAATGCTTTCATTTCACACTTTCATTCACACCCTTTATTAGGTAACTCTTTCTCTTTCTTTACCTTTTCAACTTTCAACCCA TTTTTCTTTCACTTCAAATTTTTAATCTTTTGCATTCAAATATATCGTTTATGTCTTCAGTTTTTAGATTGAAATATGGGTTTTCGTTTTCCCAATGAAC AAGATCAGTTTTTTTGAGTTAATGTTCCTTCAACCAATGTTCATGTATTAACTATCTTCTTATTGCAATTATTCCTTTGATTCTTATTTGATAATGCTTA TAATTTAGTGTTTTATTTTTATAAAAAATATGATTTGATGGAAATAATTGGCCTATTGTTTGAGATAATGAACTATAGCCAATGTCTTCTCCTTTTTGTT TGATTTGGATGTTAATTATAGGATTTGATAAGAGAAAACAATGTGTGTCTATGTTATCTTTAAGTTGAAGATTGTATAACACAACCAACGGGTGGTTGGT TCAAGTGGTACATGTTTGTTTCCCTTTGAGCAAGACCCGAGTTTGAGTCTTGTGTGTGCGGAGGAAAACTCGTTCGAGTGCTAGCCACACTATACTATAT ATGTTCTCGGCTCTCGAACAGGGTTGTCTATGATGTTGGTTGGTATGATTAGCACACTACATCTCATAAACTAAACCCATATTAGGATGGTTGATTTATT TGATTAATAGTATAGGTTTAATTGATAAAATTGTAAAATTTCCTTTGATTGAGTTAACTATAATTGCAGCCAATAATTTATAATGACACATGATAAAAAA TCATTGTTAGTTGCTACCTAACCATAGCTACCACGTATGTACAATAACAACCACGCCTTTATCTCACTAGGTGGGGTCGGCTAGCTACCATGTGTATACA AGTTTGTAAATTGTTTTGGGTTAATGGACTCCCGGAATGATATCGTAATTCAGGAAAATGCTATAATCTTGTATTTCAGCATATAATATGTAATTCGGCA TATATTATTGTCTGGATTTGAGATATTAGGGATTTGCTTAGAGTGCAGTTGTCCTTCTATGCATGGAAATATGTAGGATAACTCCAAGGGATCCAACCTC TGAATTTTTCTTTTTAATATGATATCTTTCATTGTTCTTTTAAACTTGAACTATTCACCATATATTTATGTCTTACTGCTATGCTGGATTTAACATTAGA AGGTCGGAATTATACGATAGTTCGTGCATCGATAGTTTTTCTTTATTTTTGTATTACGTTTTCTCTTTTTTTTTTTTACATTTCCAGTTGTAGCTGCTGG TGCATTTGATGAACAATTCTTGATAGAATAATTCCTTTTGTTTTTGTTATTGAATTCAGGTGAGGACAGGATCCACAATGTTTTCGTTATTGCAAGTACC TAGATGCAGAATTCACTGCTTAGCTAACTATTGGGGTGAAACATTCCACAGTTTCAATAAGACTTATGGAGACAATTCTAGTACTATCAGGTTGCTTAGT TCGAAAACTTACGGGCTTCAGGGAGGGCAAAGAAAGAAGTGGACTAGAAGACCGATAACTACAAATACCGAAGGCACTGGGAGAACCAAATCAAGAAGTA CCAAGAATGAAATTTTGAGTGAAACAATTTTAACAAGTGCTACTGTAAATGTACATAAAGCACCGATAGATCAATCACAGGCAATTCAGGACTGTGTCAT ACAACAAGAGATTGCCCAGAATAAAGATTTATCTAGCTTAGTCACCGTTATTGTTTTTGACATCGAGACCACCGGGTTTAGCAGGGAGAAGGACCGGATC ATTGAGATCGCACTTCGAGACCTTCAGGGTGGTGAGAACAGCACTTTCCAAACTCTTGTAAATCCTCAACGGGATATTCTTAATTCGGAGATTCATAGCA TTACTACACAAATGGTCGACAGACCTGATGTTCCAAGGATGGAGGATCTGGTTCCCATTTTAATGCGCTATGTTCAAAGTCGTCAGAAACCTAAGGGACA TGTGTTATTGGTTGGTCATAATGCTCGAGTTTTTGACGTACCCTTCATCATTCATGAGTTCCGTCGCTGTTCTACAGAGATTCCTCTGGATTGGCTGTTT CTGGACACAATGTCTTTAGCTCGTGATCTGAGGAATTCGGATGGTCTCTCTCGCTCTTTTCTCTTATATGTGCATGCGCGTGATAATTCTTGCGGTTTAT GTATGAGAATGTCTTAAATTTACGGTGATTTTACAATGTTAACAGGAACCAAACTTTCTTCGAAATCCCTTGCTGCTCTTCAGGAACTCTACAGAATTAA AGTCGACGGAGAAGCTCACAGGGCTATGGTTGATGTGAACACATTGACGTCGATACTTCCTAGGTTGACATATGATCTGAATCTGACCCTATCCGACCTC GTTTTCAAGAAATCATTCAGAGGATCGGATATTGTCGATTCGAAGAACAAGAAGAAGAGTTCATAATAGTTTTCTAACAGTATTTTGTAGTGTTATTGTG ACCAAAGAATTATTTGTAACTCTAGGAGTTGTATAATTGAAGTGAAAAGAAACATTGTTTGTAATTGTTGACATATTATTAAGAGTAATATACATGGTTA TTATGTTCCAAATATCATCATTGTCAATGAGATTTATGATTATTTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38302; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_89429
| Blastp | Exonuclease DPD1, chloroplastic/mitochondrial from Arabidopsis with 46.61% of identity |
|---|---|
| Blastx | Exonuclease DPD1, chloroplastic/mitochondrial from Arabidopsis with 42.03% of identity |
| Eggnog | three prime repair exonuclease(ENOG4111YSP) |
| Kegg | Link to kegg annotations (AT5G26940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419638.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |