| Id Trinity | FTRINITY_DN53958_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_90864 |
| Sequence | GTGACAAATCTGATCAGCAACAAGTGCAATCCTCTTTACCGTCGGTTGGGTGGTCCTCCCATCATTGCATTAGACTACTTACTCAACTTACGGTAGTTAT CTAATTGAACTAATTCACCTTCATTTCATTCATTGCACCACAATGCAAGTTCACGTGCTTGTGGGACCCATTTCCGTTTCTTCCCCTTCCGCCGCCGTTT TACCCTCTCTCCTCGATTCCAACCCCTTCCTCTCCAACGCTCCTCTGTTATCCTTCGACCGTTGTCGCCACTTTTCCCGCTGGTCTCCACTCGTAGTCGC ATCCGCCGCGGCGATCAACGGCGGAAAGAACCACTACGCTGTCCTCGGCATCGCTCAGACCGCCACTGCTGCCGAGATCAAAAGGGCTTATCGCCTTCTC GCACGAAAGTATCATCCCGATGTTAGCAAGGATTCACAGGCTCCTGAATTGTTCCAGAGCGTCCGTCATGCATACGAGGTTCTATCCAATGAAGCAACGA GAACCAAGTATGATAAGGAGCTTCAATTTGGTCGCAGGCCTTACCGGGAAAAATGGAGTTATAGCACTGAATTTGAAGATCAAGTAAGAATGTATAGGTG GGCCAACCTCAGGAAGAAAGTGCGAAGTGAAAGATACTGGGAGCATTATTATGATGACAATGAGGGCTACAATGGTGACGAAACAAATGACACGGAAGAA GGTGAAGGGAATTTAGATGAAGAGAGAGGTTCTTTTATTGAAGTGCTTAGATCAGCATTCATGTCACTTTTTTTGTTCCAGACATTCGGGTCCCGATTGT CCCTTACATATAGCAGTGTGATGGCATTGGTTGATGAGAAGTTAGACACTGGTTACAAAATCGGTTATGTAATAGCATGGATTTTGGGTGGAAGGGGTGG CATATTGCTTACATTGTGCTTGTCATTTGCAAGTTGGGTTTGTGGGAGAACCAGTAGCAGTGTAGTTGCACTGGTTATGGTAGCCATGTGGGTTGGCTCC CACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCCTTGTTAACACTTATTTACATGTCTATTAAGCTACAATCTGACCAGTTATAAACACCATGTTGCT AGCATTTCTTCTAAACTTTTGTATCTGATTATGTTCTTTACTAATGTGGTTGTACAGAAGTTCTGCTAAATATAAATAAATGTTGTAAGCTGTTTGCCGA TGATTATTTAAGTGTAAACAAGTTGATTATTCTCAGTTTATACAGATTCTGTGCAGTTGTTTACATTGAAGGAATTAAAAACCTTGAGAACTGATGAGAT ACAGAGATTTGGAAAATGAACTTAGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38413; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_90864
| Blastp | Chaperone protein DnaJ from Hydrogenobacter with 38.46% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Hydrogenobacter with 38.46% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (Hydth_1877) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434404.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |