| Id Trinity | FTRINITY_DN53967_c7_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_88815 |
| Sequence | GTGAAGAGGGACCTCATGCTCGTAGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAAC CTCAAGATTTTCTTGATTGCATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTA TGATGTTGGAGTGTCCAATACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCCGAAGTTCGTGTCTGTGCATTTGATATTGAGACCACA AAACTTCCATTAAAATTTCCTGATGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGGTACTTGATCATAAACCGAGAGCGTG TTGGGGCAGATATAGAAGATATAGAGTACACTCCAAAGCCAGAGTTTGAAGGGTGTTTTAAGGTTACAAATGTCCAAAACGAGGTTCAGCTTCTCAGATT ATGGTTCTCTCATATGCAAGAGGTGAAACCTGGTATCTATGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCTTGGAACGAAGGGCAGCCAGCCAC GGGTTCAAAATGAGTGACGAATTGGGGTTTCAATGTGATACAAATCAAGGAGAATGTCGTGCCAAGTTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTA AACGTGATAGTTATCTTCCACAGGGGAGCCAAGGCCTAAAGGCTGTCACAAAAGCAAAGTTGGGTTATGATCCGTTGGAGGTAAACCCCGAGGACATGGT TCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTACTCTGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATT TTCTCTCTTGCCACTATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTCCAGGCATACAAGG CCAATGTTATATGTCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAACAACCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTTGAATG CCTAGAAACTGGTGTGTTTAGATCTGATATTCCATCTAGTTTTACACTCGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGATCGAGATCTACAG TATGCTATTAGAGTAGAGGGCAAGATGGATTTGGAATCTGTCTCCAATTACGATGAAGTAAAAGATGCTATCATGGAAAAGCTGATAAAATTACGAGATA AACCAATACGTGAAGAATGCCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGGCTTCAGCCACCATCAATTGT TACGGATGAGGTTTGCACCGCTTGTGATTTCAACCGTCCTGGAAAGACTTGTTTACGAAATCTTGAGTGGGTTTGGCGCGGAGAAACATTCACAGCAAAG AAAAGTGACTATAATCATGTAAAGAAGCAGATTGAGTCAGAGTTTGTTGAGGGTGCTGATGATAGGCCATCAAAGTCTTTTCTCGACCTGCCCAAGTCAG AGCAACAATTAAGGCTGAAAGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTCGACAAGCCAGTTACTGAACTTCGTGAAGCAGGAAT CTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTTAATAAAGTTTGGAAGGGAAAACTA TCTGAAGCAAAATCCAGTGGTAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCCCACAAGTGTATTCTTA ATTCCTTTTATGGATATGTGATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCGAAAATCATTCAGAATGC CCGCCTGCTGGTAGAGAAAATAGGGAAACCACTTGAACTTGACACAGATGGAATCTGGTGTGCACTTCCTGGATCATTTCCAGAAAATTTCACTTTTAAA ACAAAAGAATCAAAGAGGAAGTTGACAATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAATAAATAATACAAATGACCAGTACCAGACCCTCA CAGATCCTATTAAGAAAACTTATACAACTCATAGTGAATGCTCTATTGAGTTCGAGGTGGATGGACCATACAAGGCTATGATCCTTCCTGCTTCCAAGGA AGAAGGAATTCTAATTAAAAAGCGGTATGCTGTTTTTAATGATGATGGAACTCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAG CTAATCAAAGTTTTCCAGGCTGAGCTTTTTGGCAAGTTTCTCCATGGCTCAACCTTAGAAGAATGCTATTCAGCTGTCGCTTCTGTTGCAAACAGCTGGC TTGATCTTCTTGATAGCCAAGGAAAGGATATCGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGTTGATTATGG TGAGAAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTTGCTGACTTTCTAGGTGTTGAAATGGTCAAAGACAAAGGTCTTCGATGTCAATACATCGTA GCAAGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAGACAGATGCTGACAGGATGAAGTTCTTTGTTCGGAAATGGT GCAAGGTCTCATCAGATGTTGGCATCCGATCAATAATTGACTGGTCCTATTACAAACAGCGGCTTAGTTCTGCAATTCAAAAAATTATCACTATCCCTGC TGCAATGCAACAAGTTGCAAATCCCGTCCCTAGAGTAGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAA CTAGTTGATCTCTTCCCAAAAGTAAGCCGGGATGAGTGCTTAAAAAGGCATGACGAATCTGATAGTATCCGCCTTGTGAGGGATGAAGAGATGGTTAATG ACTTGGAGGACTTCGGAAACAAGACCAAGAATTCTACATTTGGACCTAGACCAATCATACGACATTATGAAGCTAATAATGAACGACATCCTTTGAATGC CAATTGTGAAGAAGGTTTTGACCAGCAACAAAATGATAATAACAGCAATGATCAGCCACTTTCACAAAATGATATATCGTGTGATGATGTGGATAGAACT GTAGATTATCAAGGATGGCTTCAAATAAAGAAGAGAAAGTGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGAATTCTGACC GTGTATATGACACTCTTGAACAAATAAACGGTAAGAATAATCAGGGAAGAAGTAATATCAGTTCATATTTCAGAAGACATGAGGTGCTTCTGACGCAGTA CCACTGGCAGATAATACAGCTTGTTCACAGTTCACAGATTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGGTTAAGATTCCTGTTTGTGTT CCTAGAGTCTTTTACCTCAATTCTAGATCACCAATTACTGAAGAATTTCTGGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACC TGTATGAGGTCACAATTAATGAAGTTCAGTTTAGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACCAA GGTGCCACTGGAGTTCAAGGCTATAATCCAACTTGGTTCTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGACCCATGGAATTTGAGT GAATTGCACATGAAGACCACAACAGAATGTGTTTATCTCGAAAAGTCCATACAGTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGCGCTATATATG TTGGGTATTTTCCTGTATCGAAAGTAATAACAGTTGTGGTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCATGA TGGCTGCCGAGCTTTGTCTATTGAGGCACCTCCCAGGAATGACATTACTTTTAAGGTGGACTATGTTGGATATGTCAAGGATGCTGAAACAGTAATGCAA AGAGCAATAGATGATCACAGGAATGAACATCATGGTCCTATGGTTGCTGTCATTGAATGCCCCGATGTTCAACTTGTAAAATTGGGTATTCGAGCGCTAG ATGAATTTCCATGCCTGAGTGTACCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAACTTGCTGCAAAAATTGGAATGCAACGTTG TGCCGCGTCAGCCCAATGGCTTAACGAGAGAATTGCTATCTCAAGATATGCGCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTG GATACCTTCTTTTCAAGAGCGTTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGACCT GTTTTGTGGACGAGGTCTTTCTCATCTATATGTGGCTTTTTAGTGACCCAATTTTGTACAAAACTTAAATGTCCTGCATTGTCAAGCAATTATTATTATT GGAATGGTTATGGTATCCACTGTGAGTCGTCAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38520; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88815
| Blastp | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 75.71% of identity |
|---|---|
| Blastx | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 75.58% of identity |
| Eggnog | DNA polymerase(COG0417) |
| Kegg | Link to kegg annotations (AT1G08260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453891.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |