Id Trinity | FTRINITY_DN53969_c0_g4_i1 |
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Name Transcript | Ll_transcript_91309 |
Sequence | CGATTATTGATTTATCAAATTCCCCTCTCTTTTTTCAATAGAATTACAGTTTCGTTGTCATTGCTCTTTTCCTTCGATCTTCTTCATGTAGAGTATAGAG TGTGGATTAAACCCTAATTTCAGAAACCAAATTGATAAAGAAGAGAAACAAAACTGTACTCAAATATTTGCTTTTTCGCTTTGAATCCGAGCCATACTGT GCAAAGGTGAAAGCTTCAACCACGATGCAGAAAGGCTGAGGGTGTGTTTGCTGCCAAGTGCCAAGAGGTCACGGTTCAAATCCCGGTAACAACTTGTTTG CGGGTACCTACAGGACTATTGTGACAAACCCTTATATGTTTCGCCTGAGCAGTATCTTTCCTCATGTAAATCATTTGTTTGAAAGAGAATTTTGATCTGA ATGTTGCTGCAATAATTATGGATTCTTCTGCTCTCATGGGTAGTACAATTTTGGAACCTTCTGCCGATTTGGAATTTGAATCTCATGAAGCTGCTTATGC ATTCTACAAAGAATATGCTAAGTCTGCAGGATTTGGTACTGCCAAGTTGAGCAGTCGTCGGTCTAGGGCGTCGAAGGAATTTATTGATGCCAAATTTTCA TGTATAAGATATGGTAATAAGCAACAATCTGATGATGCAATTAATCCACGCCCTTCTCCAAAAATTGGTTGTAAGGCAAGTATGCATGTGAAGAGAAGAC AAGATGGTAAATGGTATGTCTATAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTTTTTCGTAGTCACAGGAGTTCTGATCC ACTAAGTAATGATGTTCGGATGCGAAGGCGGAAGAACTCAACTGGAGTTTCTAAGCTATTTAGTGCATATCAAAATGTTGATTGTTTAGAGAACTTTATG AAACATCATGATAAAGGGCGAAGTTTGGTTTTAGAAGCAGGGCATGCCCAACTGCTTCTTGAACTCTTCATGCACATGCAGGAAGAGAATCCAAAATTCT TCTATGCAGTTGACTTGAATGAAGAGCATCGACTTAGAAATGTATTCTGGCTTGATGCTAAAGGCTTGGAAGATTTTCCTTTCTTTTCTGATGTTGTTTC TCTTGACACGACATATTTTACAAGCAAGTATAAAATACCGGTGGTACTTTTCATTGGAGTAAACCATCATATTCAACCAAAATTGCTTGGTTGTGCATTG ATTGCTGATGAGACCATATACACTTTTGCCTGGCTACTGCAAACATGGTTCATAGCAATGGGGGAACGGGCCCCACAAGTGATTCTCACTGACCAAAACG AGGCTATTAAAGCAGCCGTTGCTGCTGTTCTTCCAGAAACGCGTCATTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCAAAACATCTTCAATTTTT ATGCTCGTGGCATGATAGCTTTATGGAAAAGTTCAACAAATGTATATATAAATCATGGACAGAGGAGGAATTTGAAAAGAGATGGTGGAAGTTGGTTGAC AGGTTTAACATTAGAGATGATGAATGGGTCCAGTCCTTATATGATGATCGTATGTGTTGGGTACCCACTTTTCAGAGAGATATTTCTTTTGCTGGCTTGT CCACTAGTTCACGTTCAGATAGTTTAAATTCTTTGTTTGACAACTATGTCCGCAGTGACACTTCATTAAAAGAATTTATAGAACAGTACAGAGTGATTCT GGAAGATAGGCATGAAGAAGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTGAAGTCTCCTTCCCCTTTTGAAAAACAAATGTTATTG GTTTACACACATGAAATTTATAGAAAGTTCCAGGTTGAGGTTTTGGGTGCAGCGGCTTGCCATCTCAAGAAAGAAAATGATGGCCTGACTGCAGCTTATA CTGTCAAAGACTTTGAAAATAATCAAAGCTATATGGTGGAATGGAACACATCAAACTCAGACATAAGTTGTTCATGTCGCTCGTTTGAATATAAAGGTTA TCTCTGTAGACATGCTATCGTAGTTCTACAAATGTCTGGTGTTTTCAGCATCCCACCAAAGTATATATTGCAAAGATGGACAAATGCTGCACTGAGCAGG CATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCCAAGGTCCGGCGTTTCAATGATTTATGTAGACGGGCCATAATATTGGGTGAAGAAGGTTCTTTGT CACAAGAAAGTTACTTTATTGCTTTAGGTGCCATAAGTGATGCTTTCAAGCTATGCACAAATTTGAACTCTGCTGAGAACGACTTGAGACCTGATGCCTC TGCTATCAATGTTGTTTCCAATGTTGAAGAAGAGTATCAATCTATTATTGCATCTAACAATAAGGCCCCTGATCCAAAATTGAACACCGGTAATAAGGCT GTAAGGACCGGCAGGGATATTGTGAACACAGAAAATGTTGAAGGAAATCAAGGAAAGGTACTTCAGCTTGAATTAGCGAATGGCAAAGATGATTTTCAGC AAATGGACCTGACTGATCCGAGGTCACATAACGTCATTCCTATGCAGTTTCACAGTATGGTGCCAACTCTGTTCCACAATGTTTCGTCAACACCATTTCA TCATACCACAGCTTCAACTCATTTGCACGATAATCGTCTTCCTCGTTAGCTGAATGAACGCCTGAATAAAAACTTGCCTTTTAAATTACCTGAAAGACCA TGTACAAAATTGTAGATAGGAAATGCTACTTGTGGAAGACACTACAGCTTTCAGTTAATGGCATCTGTCCTGTAGGGTGGCTAGGCGGTATCAAAGTTGA TAGTTGCGCTAACTACTAACTTGAGTACCATTATTCTCAAAATGTAATCTCGCCATCGATATCGGCATCTTCTGCAGTTTTTTCTCGCTAAATGTTCTGT TAGGTTTGTGCAAGAAAAATGAAAATGATTTCTGAACATCTGGTATAACATTCCATGTAGGCACTGCGTCAATGTGAATGTTAATGATTGCCAAGTGATA CCATATCTTAAGGTGTATAGAAGTACAAAGTTTTTGTATTCTGAATGTTTAAATGATGCAATTGTTTGGGTAATATGATGGTAGCTGCAATTATTGTGGC ACACTTGTTTTTAGGGTGGATTAAAACATAGGGAAACATGGATAGGACACGAGAAATGA BLAST |
Tissue | flowers |
Gene name | LI_gene_38532; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91309
Blastp | Protein FAR1-RELATED SEQUENCE 4 from Arabidopsis with 62.18% of identity |
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Blastx | Protein FAR1-RELATED SEQUENCE 4 from Arabidopsis with 62.33% of identity |
Eggnog | protein FAR1-RELATED SEQUENCE(ENOG4111EGR) |
Kegg | Link to kegg annotations (AT1G76320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448299.1) |
Pfam | FAR1 DNA-binding domain (PF03101.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |