Ll_transcript_88902

• Id Trinity: FTRINITY_DN53981_c0_g1_i14
• Name Transcript: Ll_transcript_88902
• Sequence: TCATAGCGCCTTAGTAGTAATGATATATAAAAAAATAAAAAATGAGAAGAGAAAGTGACTCCACACTTCACAACTTAGTTGAGTGAGTTTCCAATAGCAC TTCATAGATTGTTCGAAAGCATTGAAAATTATTAGGTTAGGTTTGAATCATTGTATTTAAATTATAGAAGAAAAGAACGAGAACAACACAATAGCGATCA ACCTCTCTCTCTTCACAATAAAACGATTTACGTAATCACACAGCATTTCCACTTCAACCTTCGATTTACAACATGTTGCCCCTTTCTCTTCTCAAAACTG CCCAAGGGCATCCAATGTTGGTGGAACTGAAAAATGGTGAGACTTATAATGGGCATTTGGTTAATTGTGATACATGGATGAACATCCATCTCAGAGAAGT TATATGCACCTCTAAAGATGGAGATAGATTTTGGCGTATGCCTGAATGCTACATTCGTGGCAACACGATTAAGTACCTTCGAGTTCCTGATGAGGTTATT GACAAAGTTCAGGAGGAATCCAAGAGCCGCACCGATCGCAAACCTCCTGGTGTGGGACGTGGAAGGGGAAGAGGAGGTAGCCAGGATGGTCCTGGTGGAC GTCCAGCAAAAGGAATTGGGCGTGGTGTTGACGAAGGCGGGGCTAGAGGGCAAGGAGGAAGCCGAGGAGGAAGGGGTGGCATAGGTGGAAAGCCTGGTGG AAACAGAGGTAAATCACCCCCTTCATTATTCCAAAATTCGTTCACTGCATGCATGTATACCAACTGTTAGTTTTTCGGCTTATAACAATCGATATGAATA TTTTGGCTTCCATCTCTCAAATTTCTTATGAAGGAGTTCAAAGTAGTCCATGCTATTTTCATTTATTTTGCCTGGATGAGCTCCTGATGAATTCATCAAT GTAAAAAGTAAATTATTACTAAAGGAACTCAATGTCTTATGTTCCCTTGTTTTGATGTTTAAGGGGAAAACGGGTATGGGAGTTTGAGTTATAGTAGAGA GAAGGTATATGTTAGTAAGTTAAATCCCAATGTAGTTCAACTTTGTGTTGGAATCCTATATCACTTACCTGAGGGTATTATACGCGATCCAATGAATAGC TAATATAAAATAAATCATGTCCCCATTCTTCCATCCCTTCCAACATGTTACGTAGCATACATCGTGTGAATGAATCTCGTTCAATATTTTTGCTTATTCT GATAGCTGCAGGGCGAGGCAGGGGTTGATTTGAGTAAGTGATGTTGGAACTACTGCAGTTTGATGAGTTGCTACTTTTAGAGCCATTGGTGCTCGTTCAT CAAATTTGGCCGATTCTGTTTCCTGTGCATACTTGGATTTTATTTTTTCGATGTTTTTCTTGCGCTCGTGGTCTCGAAAATGGCGATATTATAGAATTTA CAAAAGCTTCTATTCAGACAATATTTTATAATGCCTTCTCTATGGTAAACTTGCTTTTGTGTGTTAGTTATTGAATAGCTCCAAACTTGCTATGGTTGGA AATGCTCCTTCCCAAAATTGAATTCATGTTCCAGTAATTTTGAAGGCATAGAATATGATATTATTCATTTTGTCATGTTCTATCTTTATTCTTGCCACTG CTGAAGCCTGAACTAATAGAAAAAATAATTTGCTTAGCATGCCTTAAATTTAGGCTATTTGTACTCGATTTTGTGTATTGGCGCTCTCTTACTTACTGCA AACTTTGATTTGCTGAAGTGCGCTTTATTGATTGATATTTTTAATAACATAAATTTCTTTTTTATTGTTTGTAGTGACCTATTTACTCAGTTTTATTATA TCTAACAATTTTACAAAAGGAATTGGTATCAGAAAAAATTAAGGAGAGAGTTTGATAATTTAATAATATTAACTTTCGGATCTTAATTAGCTGATTTATT GAGGGATTGGGTTAGTTGTGAGGGGTAATTAATGAAAATGGATAGTCTTAGTTGGTGGAGAGTCCATTATCATTTAAGATGGTGACACGTGACGTTAAAA AAAATTGAACGGTGAAGATTTAAAAAAAAAAAGTTTAAG
• Tissue: flowers
• Gene name: LI_gene_38643;
• Additional information: details;

Expression of Ll_transcript_88902

FPKM

• FPAB: 9
• FPNAB: 7.8
• LF1: 5.2
• LF2: 5.3
• LF3: 6.6
• LF4: 8.3
• UF1: 5.8
• UF2: 4.3
• UF3: 8.9
• UF4: 9.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_88902

• Blastp: Probable U6 snRNA-associated Sm-like protein LSm4 from Nicotiana with 89.26% of identity
• Blastx: Probable U6 snRNA-associated Sm-like protein LSm4 from Nicotiana with 89.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426976.1)
• Pfam: LSM domain (PF01423.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;