Id Trinity | FTRINITY_DN53983_c3_g2_i3 |
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Name Transcript | Ll_transcript_90426 |
Sequence | ATTATGTTTGTGCTTATAGCTAATAATGCTATAGCCCTAACCCAAAAAGAAGTATTAAGAATCTGTGCAAAACGCATTCCTCTCTTCGATTCGTTATCTT CCTCGTGCCGTCACCGATTTTCTCATCAAACCCTAATTTTTCAATTTCCCCAAATCCCTATCGATCTTAACTTTTCACCACTCACTCGTGTTCCCGATTT CAAATTCCTCATTCCCCTTTTCAATTTTTAATGTTCATCGATCCTCATCATTATGCATTTCTTCTTCACCTTAATGGAGAAGAACAAGAAGGAGAATCGT GAATCTCACCCTCCGAAACACGCGCGTGCGGTTAGGAAAATCAGAACCGGTTGCATATGCGGCCATGAGGATGATTCAATCGATGGGGTAACGAAGCAGA TGGCTTTATCAATTTTAAACCCTATTTCTTCCAATATCGATGTTTATCGCGCCTCGTCGGAAGAAACGGGTCCAATTAGAAGGGCTGAAGCTTGGTTTGT TAAGTTAATTTGCACTGTTTTTGTCAGGAATAACTCGTTGGATAGGTTTATAAGTTATTTTAGTAAGCATTTAACTCCTTCGATTGTTATGGATGTTATT ACTAGGTTGCACAATCCTAATTTGGGGTTTAAGTTTGTTGAATTTAGTAGAGAAAGGTTGAATTTGAGTCATTCTTATTGGACTTATAATATGCTTCTAA GGTCACTTTGTCAATCGGGTTTTCATAGTTCCGCGAAATTGGTGTATGATTGGATGAGGTGTGATGGGCAGTTGCCTGATAATTTGTTGTTAGGGTTTTT GGTTTCGTCGTATGCGCTGGCTGGGAGGTTTGATATATCGAAGATGTTGCTATATGATGTTCAGCGCAATAATGTTCGAATGAAGTCTGCTTTTTATAGT GACTTGTTTAACTTTTTTATAAAACAGAACAAAGTAGGTGACGCTGTTGTTTTGATTAGGGAGCTTATGAGGTTGCATTATTATCCGGAAACTTACACAA TCAATATTTTGATACGGGGTTTGTGCAGGGCCGGAGAAATTAATGAGGCTTTTAAGCTTCTCGATGATTTCATGAGTATTGGTTGTTCGCCTGATATATT TACGTATAACATTCTTATACATGGTTTGTGTAGAATTCATGAGGTCGATAGAGCGAGAAGTCTGCTAAAAGAAGTTGGTTTGAAAAGTGAGTGTGCCCCT GATGTAATTAGTTATTCAACAATAATATCAGGGTATTGCAGGTTGAGTAAGATGGAGGACGGGATTTTGCTTTTCGATGAATTGATTATGTCCGGAATTA AGCCTAGTACATATACTTTTAATGCTCTTATTGATGGCTTTGGTAAGGCTGGTGATTTGGGTTCTGTGGTAGCCTTTTATGGGAAGATGCTCATTCATGG TTGTCGTCCCGATGTTGCTACTTTCACATCCATAATTGATGCCTATTTTCGAGTTGGACAGGTGAGCCATGCCTTGGAAATGTGGCATGAAATGAATAGA AGAAATATTTGTTTGAGTTTATATACTTTCTCGGTTCTTGTCAGTGGTCTGTGCAAGAACAGCAGACTACATGAGGCTCGTGACATTTTAAGACTACTGA AGCAGAGCAACATTGTTCCCCAACCATTTGTCTACAATCCAGTTATTGATGGATATTGCAAATCTGGGAATGTTGATGAGGCTAATAAAATTGTAGCAGA AATGGAGGAGAAGAAGTGCAAACCTGATAAGTTGACATATACCATTCTTATTATTGGACATTGTATGAAAGGGAGAATGCATGAAGCAATTGGCATCTTT GATAAGATGTTGAGAGTTGGTTGTGCCCCTGATGAAATCACTATAAATAATTTGACGTCTTGTCTCATGAAGGCTGGAATGTCTAGTGAAGCTGATCGCA TCAAGGAAGCTCTAATTCGGAAACCAACCTCTGGTACTAAGTTTGTACTTAATAAAAGTACAAATGTGAATATGCCTATTGCTGCTTATTGAAGTGCGCA AACCAGTGGTTAAAAATGACCTTCCACTGTTATGCCTTGAGGACTGGGTGCATGTATTCAGCTTGTGGAAAAAAAGAATAACGTTGCCAATCAGAGTGTC TTTAATTATTGAACACTGTCAACACCGACCTTTGCAATACGCTCCCTCCAAGATTCTGCTGATCGTTTTTGAACTTGAAGTTAGGTATGAGTACATTTTT TATTTATCTTCGAAATTTAAAATTTCATTTTCCACTACAAGTGGGTCCTGTTTTCTTGTGGTTTTATTACAATGCATTGATTTTATTGTCAGTTCTAAGA GTATATTGACCTCTACTTGAAAGAAATGGAATAAAATGGAAGTATTATTTCTTTTTCAAATTTTATATTCAAGCTGTGTTCTGAAAACTGAAAAGATAGG AAGATCATTAGTGCGGACTGAGGATTATGGAAAGCAGCCAGACAGAAAAGCCTATAGATGTGTGTTATTAGTTTTGTGTAATTTTATGGTAAAATAAATT ATGTTGTGAAAAGATAGGAAGATTATTATGACGGAATGTGGATTATGAAAGGAGGCATAAGTTAATTCCGCCTTACTGCAATTGTCCTACTCATTTAGCC AAAGATTTAGTCTCTTTGGTTTAATTATCTTTTTCTTTGATATGCCTTATTATTATTTCTATATGCATCCACCGTAGTCCTTTTTTCTGTAAACTCTTCC AAAATTTTCCCTCAAAATAAGATTTTGGCATCATCCATCCTCCTTTTTTTGAGTTGAAGAGTAATGCATTCTCAATGAACATAAATTATGATAGAGCATT ATGGTGTTGTTCAATCTATAGCCGACTCCCTAGTGGGATAAAGGCTGGGTTGTTGTTGTTTTCATGTTGGGAGAGAACAAGCTGAGACATTCTAAGAATG CCCAATATGTTATATACGTCCTTACAGTTGAGAACCTGATATATGAACAATTAATATTGTTTCCCTTGCCATTCAAAATTGTTGGATTTTTTTTTCTTGG CTAAAACTTATCTCATTAGGTTATATGCTTATGATAATGTCATTTTATAGCAGTAAGTTACATATATTGCACCTGTAGTGTAAAATCTTTCTACCGCCAT TTGGAAGTATTTCATTTTTTTACCAGAAATTATGAAGTGACATAATTTCTTGTAGAGAAATAAGTTCAAATTCTATCCAATTCAATGTTAATCTTGTTTA GCAATTTATAATAGAGTCTGGTTTATCTAGTCTATAACATCATGGAATTGAAATCTGATCATTTACTTATTGATAGAATTGGTTGTTTGTTTTCCTCTAG CAGGTCTGGCATTGCCACATTGGTATTCTGTTGCAACCGCGAACTCCTGATTCCCAATCCCATAGGGGAAAGAAATGATGCTGTTGATGCCTCAATTTTA TGGCCTTGCAGGTTGAGAATGCATGTCTATTAGGTTTGGCAGTACTTGGAAAAGCACAAGTTTCATGCTTCACAATCCTAAGCATGTCACCAATGTGGAT CAGATAACAAGCTTTATGGTTGCTGCATGTCATCAAATGTGGACATAAAGATCCTCCCCAGTTAGAGGCAAAACTGTAGAAGGTGTGGTTCCAAATCCAG TAGTTAAAACATGCTGTTGCTGTTACATATTCCACTGATGTGTAACAAGATGAGGTGTGTCATTGTTGAATGAGATTTTTTGCTTGAAGTTCATCTTATC ATTCTTTAGTTGAAAAAGGTTACTTCACATTTAAGCACATTCATTGATAAAATGACAAGTCATTACAAATGGAACAACAAATGTTTCTCCAATTTTTTGG TGTGATGATAATCAATTTGTTCATACATTATTCATTTGGCAATTTCAATCAATAAATTCCTTCAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_38655; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_90426
Blastp | Pentatricopeptide repeat-containing protein At2g06000 from Arabidopsis with 47.63% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At2g06000 from Arabidopsis with 47.63% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT2G06000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433737.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |