| Id Trinity | FTRINITY_DN54001_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_140705 |
| Sequence | GCTTGTAGTCTCTCAACCCACTAGGGTTTAAAATTGTTCGTCCTGAGAGCAGACGTGTGCACATTTGAAAGACAAGAAAAGAATCAACGACTACGCCACC GTCTCCAACAACTTCTGGCACAAAACAAGATGCGTAGGAACAGTCCGGGATACTACAGTCCTCCAAGGAGAGGATACGGCGGTAGAGGGAGATCACCGCC GCCGCCGTCACCTCCTTATAGGAGGGGACACGGCGGTGGAGGAGGCAGGCGCAGGGAAAGCAATAATGGAAGCCTTCTTGTCAGGAATATTCCTCTCGAT TGTCGACCTGAGGAACTTCGGATCCCGTTCGAACGGTTCGGTCCGGTTCGCGATGTCTACATTCCAAAGGACTATTACTCAGGACAACCCCGAGGATTTG CCTTTGTGCAATTTGTGGATCCTTATGACGCCTCGGAGGCACAGTACCATATGAACGGACAAATTTTTGCTGGAAGAGAAGTAACCGTAGTTGTGGCTGC AGAGACAAGAAAGAGACCAGAGGAGATGCGTCACAGGACTAGTAGGTTCAGAGGACAGGGGAGCTATGGGGGGCGAAGGTCTTCACCTTATGGTAATATC TTCTTTAAAATCTCAAGTTGCATTTACCTTTTCAAATCGTTACATCATGCATGGATAAGTGGAGGGTTTTCCTTCATTGGAAGGTGGTGAACATATAAAG AGGGGAAACAAAAAGAAATTCGCATAAGGGAAGAAGGGAAGGAACTGGGGTTGACTCTTTTTTTAAAGTTTTATAGAAAAACCCCTAAAAAACAATGCTA TGTAAATAAGAAAGAAGGGCAAATAGGATATCTCCCATTTAAATTTTGGTTTCATTACATAATTTAAGAACTTGAAGACTGGTTTCTTGTTGGAATGCTG GTTCTTCTGAATGATTGGTGACAGCATGTATTGCATGATGTTTTCTTGCTCATCTTTTGATAGTTAAGACTAGTCCGTACAGGCTTATATCGCTGGGGTG AGGCTATTAATAACACTCGCAAATGTGTATTCACATTTCCTATTTTAACGAATCCAAATTTTAATTTAAAAACAAAATATTTACTGATCTCTAATGAAGA GTGTCCAGAGAAACATTCCTTGCCTGAGGACATATGCTTTGTTATTTTATTCTGTATCCTACTCACCCTCTCAACTTCCAAGGCATCTTGTTAAATTTAG GATAGTGAACTTGTTTCACCGGTTGACTTTCATATATAATATTTTCAAGAATTGTTTACATTGAATTTTTGTTCTTGTGTTGGCTCAAATGTGATATGAC ACTACTTAACTGGTAACTTTTGTTTATAATTATGTCAAATCCATTAGGGCGTTATCGATCTCGCTCAATTTCCAGATCTCGCTCACGCTCACCACCTTAT CACTCTGGTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38825; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_140705
| Blastp | Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 80.29% of identity |
|---|---|
| Blastx | Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 83.15% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT3G55460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460827.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |