Id Trinity | FTRINITY_DN54005_c3_g2_i6 |
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Name Transcript | Ll_transcript_142147 |
Sequence | CAAGAAGTTCAAGAAGATCAAGAAGATCAAGAAGTTCAAGAAGATCAAGAAGATCAAGAAGTTCAAGAAGATCAAGAAGATCAAGAAGTTCAAGAAGATC AAGATTTCCAAGAATAGAAGACCAAGAAGATCAAGATTTCCAAGAAGATCAAGAGTATCAAGAATATCAAGAAGATCAAGAATATCAAGAAGATCAAGAA TATCAAGAAGATCAATATCAAAGTTCAAGATCAGATAACCACAATGACAAACAAATTCAAATTGACAACATATTTTACAGAAATTGAAATGCTTTCTTTT TGACAACACATTTTACATTTGAGAGCACACACAAACATATTCACTAAAACTTACATACTGAAAATATCTAATGTTTTGAAATCAGATATTTTTCTATCAA AAAATGCATGCATACTAGTATTAATTTTGTTTGCAGGAATCCTGACCATCCGTTTTCTTCAGGCGTGTCTTTGGCTAAGCTTGCTGCTGTTACATTGGAT GAGCAAGGGAATGAAACTTTTGATACTAGTGGTGCTTTGGATAGATTGAGAAAGTCAGTGCATCTTGAGAGGCTAGCTCTTTATCATGATTCTGATAGGC ATCCTTGGGAGATTCATAAGAGATGGGAGGATATTAGTCCAAGTGAATGGATTGAGATATTTGGAGATGGCATAAATGAACCCACTGATGATCATAAATT GGTGTCTAAGTGGGCTATGAACCGTACATATTTGGTTTATCCTATCAATGCAGTCCTACAGTATCATCGTCTTGGAAACCAAGAAAGAATAAATCCAGAA ATTCCATTTGAGAAAGTTTCCCTTGTCCTTACAGATGTCTCTCTTACTCTAACTGAGGCTCAGTATCATGATTGGATTAAACTTTTGGAAGTTGTTTCAA GGTACAAGATATATATGGAAGTTTCTCATTTACGACCAGCAGTTCCTATTTCGAAGGCTCCTTATTTATGGTGGCAGTATGCTGCACATGCTATGCAGCA GCAGAAGATGTGTTACCGCCTGTCTTGGGACCAAATTCGTCATCTTTGCCAGCAGCGGCGGCGATACATTCAGTTGTATGTGGCTTCTCTTCAACATTCC GCACATGTTAACCTTGCTGAAATCAGAGAAATAGAAAGGGATCTTGATTCAAAAGTGATTCTTCTTTGGAGGCTACTAGCTCATGCCAAGGTTGAATCTG TGAAATCAAAGGTAGCAGCTGAAGAAAGGAGGATCAAGAAAAAAAGCTGGTTTTCATTTAGTTGGGGTGCTGACACAGAAGAGGTTTCTTTGAATGACGC TTCTGAGGGGTCACAGCTTAC BLAST |
Tissue | flowers |
Gene name | LI_gene_38860; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142147
Blastp | Putative vacuolar protein sorting-associated protein 13A from Dictyostelium with 24.26% of identity |
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Blastx | Putative vacuolar protein sorting-associated protein 13A from Dictyostelium with 24.26% of identity |
Eggnog | Vacuolar Protein(COG5043) |
Kegg | Link to kegg annotations (DDB_G0286725) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418850.1) |
Pfam | Vacuolar sorting-associated protein 13, N-terminal (PF16908.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |