| Id Trinity | FTRINITY_DN54005_c4_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_142159 |
| Sequence | TAATGTTACGAGAGTAGAAACCATTGGTGAATATTTATTGTTATATTATTCTTATTCTATGTTGGCTTAACCCTAAAGAAAGACATTAACACAATATAAG AGGTTTTGAATCCCAATCTTGCATCAGAATCATTCTACAGAGACTGAAAAACAATGTCGATCTTCGAGTACAATGGAAGTGCCCTAGTAGCCATGGTTGG CCATAACTGTTTCGCCATTGCTAGCGATCGAAGACTTGGAGTTCAGCTTCAAACCGTAGCCACCGATTTTCAAAGAATCTTCAAAATTCACGATAAACTC TTCATCGGTCTCTCTGGCCTCGCTTCTGATGCTCAAACATTGTACCCTTTTGCTTTGATTTTCATATTTCAACGTTTTTTTGAATAAAAATCACTTTTTT ATTTATGTTGTTTTTTTTGTTTGTTCTTAATTTGAAGGTATCAGCGTTTGGTGTTTAGGCATAAATTGTATCAGCTTCGCGAAGAGAGGGATATGAAGCC TGAGACTTTTGCTAGTTTAGTCTCTTCTATGCAATATGAGAAAAGATTTGGTCCATACTTTTGCCAGCCTGTAATTGCCGGATTAGGGGATGGAGACAAA CCATTCATTTGCACAATGGATGCGATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTGCTGGCACTGCATCTGAGTCTCTATATGGTGCTTGTGAAG CGATGTTTAAGCCTGACCTGGAACCAGAGGAATTGTTTGAGACCATCTCTCAAGCACTGCTATCGTCCGTAGATCGTGACTGTTTAAGTGGCTGGGGTGG ACATGTCTATCTTGTCACACCAACTGAAGTAAAGGAAAGGATCTTGAAGGGAAGGATGGATTAACTTTTACATCTCTTTCTTCTTTGTTTAATTTGGATC TTATTGTGAGACCAATGGTTAATGGAAATTTACAAGTACCTGGAAAATATTTACAAATGGATTCAATTGTTCTTTACTTGGATTATCAGTGAAAGGAGAT TATAAGTGTAAGATTGTTTGCTTTATGATTCGGAGATAATTGGTTCGTATTATGGAAATATTCTCTTCGCTTGCGAGACTAAAGTTGAACAAAGCATGTC CTTATATTTTGTAGGTAAAAGCAAATAATCTATAATTTAACTATATGAAGCTTGTATGTCAAAGGTAGAATAAAGATTTATACATTTTCAATGTTATTTA C BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38867; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142159
| Blastp | Proteasome subunit beta type-3-A from Arabidopsis with 90.24% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-3-A from Arabidopsis with 77.87% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8) |
| Kegg | Link to kegg annotations (AT1G21720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458027.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |