| Id Trinity | FTRINITY_DN54005_c4_g5_i3 |
|---|---|
| Name Transcript | Ll_transcript_142169 |
| Sequence | TAATGTTACGAGAGTAGAAACCATTGGTGAATATTTATTGTTATATTATTCTTATTCTATGTTGGCTTAACCCTAAAGAAAGACATTAACACAATATAAG AGGTTTTGAATCCCAATCTTGCATCAGAATCATTCTACAGAGACTGAAAAACAATGTCGATCTTCGAGTACAATGGAAGTGCCCTAGTAGCCATGGTTGG CCATAACTGTTTCGCCATTGCTAGCGATCGAAGACTTGGAGTTCAGCTTCAAACCGTAGCCACCGATTTTCAAAGAATCTTCAAAATTCACGATAAACTC TTCATCGGTCTCTCTGGCCTCGCTTCTGATGCTCAAACATTGTATCAGCGTTTGGTGTTTAGGCATAAATTGTATCAGCTTCGCGAAGAGAGGGATATGA AGCCTGAGACTTTTGCTAGTTTAGTCTCTTCTATGCAATATGAGAAAAGATTTGGTCCATACTTTTGCCAGCCTGTAATTGCCGGATTAGGGGATGGAGA CAAACCATTCATTTGCACAATGGATGCGATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTGCTGGCACTGCATCTGAGTCTCTATATGGTGCTTGT GAAGCGATGTTTAAGCCTGACCTGGTTTGTCATGAAATTTAATGTGTTCTTTATTTTGTGTGAATCTTTTGTCTTGTGTGATTTTGCAAATTAGTACAGG CATGTCAACAGTTTTTTTTGGTTTTGCTAGTGTTTTAATAACAAATAAACATCTATAAATGGACATGTCGATTATTTTGTGCATTAGATCCAGGACATCA CCCATTAAACATTATATTGCACCACAGTTATAAAATAAGCTCATTATGGAATATAGATGGAAGATGAACTTCGAAGTAGAGGCGATGCCTTGAACTTCGA AGTAGAGGTTTTTATGTATAGGATGGTGTTTGAAACACTGATTCAGAATGAAATCTTTTGTTTGTTTCAACTTTCAACTGCTAAATCATATGTTTGCTTC GGCGACCCAAATAGAAGAGGCTAATAATAGTGACCTAATTTTTGCAGTTACTTTAATCTTCAAAATTTTGTGCATTATCAATTTAACTTATGGTTTAGCT TGACAGGTATTGTTAGTACAGTTTGTCAATGTTCTCGGAAGACAAGCACCTTATTTTTTCTTGCTTGGTTTCTTATCTAAATGCAGGAACCAGAGGAATT GTTTGAGACCATCTCTCAAGCACTGCTATCGTCCGTAGATCGTGACTGTTTAAGTGGCTGGGGTGGACATGTCTATCTTGTCACACCAACTGAAGTAAAG GAAAGGATCTTGAAGGGAAGGATGGATTAACTTTTACATCTCTTTCTTCTTTGTTTAATTTGGATCTTATTGTGAGACCAATGGTTAATGGAAATTTACA AGTACCTGGAAAATATTTACAAATGGATTCAATTGTTCTTTACTTGGATTATCAGTGAAAGGAGATTATAAGTGTAAGATTGTTTGCTTTATGATTCGGA GATAATTGGTTCGTATTATGGAAATATTCTCTTCGCTTGCGAGACTAAAGTTGAACAAAGCATGTCCTTATATTTTGTAGGTAAAAGCAAATAATCTATA ATTTAACTATATGAAGCTTGTATGTCAAAGGTAGAATAAAGATTTATACATTTTCAATGTTATTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38867; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142169
| Blastp | Proteasome subunit beta type-3-A from Arabidopsis with 87.04% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-3-A from Arabidopsis with 87.04% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8) |
| Kegg | Link to kegg annotations (AT1G21720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458027.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |