| Id Trinity | FTRINITY_DN54005_c4_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_142170 |
| Sequence | TAATGTTACGAGAGTAGAAACCATTGGTGAATATTTATTGTTATATTATTCTTATTCTATGTTGGCTTAACCCTAAAGAAAGACATTAACACAATATAAG AGGTTTTGAATCCCAATCTTGCATCAGAATCATTCTACAGAGACTGAAAAACAATGTCGATCTTCGAGTACAATGGAAGTGCCCTAGTAGCCATGGTTGG CCATAACTGTTTCGCCATTGCTAGCGATCGAAGACTTGGAGTTCAGCTTCAAACCGTAGCCACCGATTTTCAAAGAATCTTCAAAATTCACGATAAACTC TTCATCGGTCTCTCTGGCCTCGCTTCTGATGCTCAAACATTGTATCAGCGTTTGGTGTTTAGGCATAAATTGTATCAGCTTCGCGAAGAGAGGGATATGA AGCCTGAGACTTTTGCTAGTTTAGTCTCTTCTATGCAATATGAGAAAAGATTTGGTCCATACTTTTGCCAGCCTGTAATTGCCGGATTAGGGGATGGAGA CAAACCATTCATTTGCACAATGGATGCGATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTGCTGGCACTGCATCTGAGTCTCTATATGGTGCTTGT GAAGCGATGTTTAAGCCTGACCTGGAACCAGAGGAATTGTTTGAGACCATCTCTCAAGCACTGCTATCGTCCGTAGATCGTGACTGTTTAAGTGGCTGGG GTGGACATGTCTATCTTGTCACACCAACTGAAGTAAAGGAAAGGATCTTGAAGGGAAGGATGGATTAACTTTTACATCTCTTTCTTCTTTGTTTAATTTG GATCTTATTGTGAGACCAATGGTTAATGGAAATTTACAAGTACCTGGAAAATATTTACAAATGGATTCAATTGTTCTTTACTTGGATTATCAGTGAAAGG AGATTATAAGTGTAAGATTGTTTGCTTTATGATTCGGAGATAATTGGTTCGTATTATGGAAATATTCTCTTCGCTTGCGAGACTAAAGTTGAACAAAGCA TGTCCTTATATTTTGTAGGTAAAAGCAAATAATCTATAATTTAACTATATGAAGCTTGTATGTCAAAGGTAGAATAAAGATTTATACATTTTCAATGTTA TTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38867; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142170
| Blastp | Proteasome subunit beta type-3-A from Arabidopsis with 90.2% of identity |
|---|---|
| Blastx | Proteasome subunit beta type-3-A from Arabidopsis with 90.15% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XSC8) |
| Kegg | Link to kegg annotations (AT1G21720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458027.1) |
| Pfam | Proteasome subunit (PF00227.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |