| Id Trinity | FTRINITY_DN54023_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_142948 |
| Sequence | ATGGAATTAGACAATTGCATGCCATATAATAATTTCTGGTGTGGAAGCAAAGTATCATTGATTCATAGTAAATAAAGAACTAAAAAGTGGGAACAGAGAG GGTTCTGTTTCTTTCTTGAGTTGCACTTAAGGGTTCTGTTTCTGTTTCTGTTTCTTGCTCTACTATATAAGTATACTCTCTGAGACAGAGAGAAATAAGT GAGTGAATAAATATATATATATATATATAGATTGAGATATACATATATTGGTGTGAGAAATGCAGCAGCAACTGATGCAGATGCAACCAATGATGACAGC ATACTATCCCAACAATGTCACCACTGATCACATTCAACAGGTTGGATCCTTCTTTTCATCTCAAAATCTCTCTTTTTTCTTCTTTACTTAACAACATTTT TTTTGTATCTAGTTTCCTTCTTCTTATCCCTATATTACTGCTAAACTCTTTTTCTTTCAGTGCCACTTGTGTCAATGTTTTTATGCTCATACAGTTTTAT TTTTATTCTGCTACAAGTTATGTAAATTTTGTGAGTGTTCAAGTCATTGGTGTTTTGTCATATTAGACTGTGTTACACTACACACCTGAGATGATAATAC TTGCTTTATCAAATCCAAAAACAACTACTATTTGGCCTCTTCTAATTTTTTCATCACTTATTAAGTTAGACTCATTCTAAGGACTTATAACAGTATATTA TTTGCTCTAATCATACAATAAAGTGTTGAAACATGAAGTTATTAGTTATATGTCCCTCTCTGAAGTTAATTTTAATAATATCCCAGCACTTTGTACTGTC CAAAGTTTAAGCCTTTAAAGTTTTGGTTCATTGCATGTGATTACAATTAATTTAAGAGAGTTTGAGATTAATTTAAGAAGTGAGAAAATCACATACCAGA AAAGGTTTTAATTTATATTCAGTCAATTTATTTTTTATTTTAAATGATAAATCAGTTCAGCAAGTACTATTTCCACTGCATTTTCTTGTTATGATATTAT TATTGACTTCATTTAACTATTTCTCTCACTTTTTCAAACAGTACCTGGATGAGAACAAGTCATTGATTCTGAAGATTGTTGAAAGTCAGAGCTCTGGAAA GCTGAGCGAGTGTGCTGAGAACCAATCAAGGTTGCAGAGAAATCTCATGTACCTAGCTGCAATAGCTGATTCTCAACCCCAACCACCTACCATGCCTGGT CAGTACACTCCTGGTGGGGTTATGCAGCAAGGAGCACACTACATGCAAGTTCAACAGGCTCAGCAAATGACACAACAACAACTAATGGCCGCACGCTCGT CCCTTTTATACTCCCAACAGGGATATTCAGCACTTCAACAGCAGCAAGCCATGCAAAGCCAACTCGGCATGAGTTCCGGTGCAAGTTCCGGGCTTCACAT GTTTCAAGGTGAGGCCACTAGTGTAGGAGGCAATGTTGCAACCATAGGTTCCGGAGGGTTTTCTGATTTTGCTGGTAGAGGACTTAGTGGCAAGCAAGAT ATTGGAAGTTCAGAAGGAAGAGGAGGAAGTTCTGGTGGCCATGTTGGTGAAGGGGGTGAAACTCTCTACTTGAAATCTTCTGATAATAGAAACTAAACCT CTGACACAGTGATGTGAAGTTATGGCCTTTCTAGTCTTAGCATTTTCGTTATAGAAGAAGTCATCAGTGAACCTTTTTTTAGTATGCGAAAGAAAAATGG AAAAAATTTGCTGCTTAGAATCAAGTTTTTGTTTTAATCTAATGTTAAAGGCAAACAATCACACCATTGCCTTAATGTTTCTGAAGTAGTATTGCTGTAC TAGTACTAGTAATATGATGCATGTTCTATCTGTGTAAAATTTTGGCCATAAAATGAGGTTGTGTTAAGGTCAAGAAGCTCATTTTCAAGCTTTGTTCTGT ATGTTCACAGTTCAGTTCCTCCACTTAATATTTGATCTTGCAACATCTTGGTTCATAGTTGATATTGATTTTTCTAGCATTGATATATTATTACAAGTAG GTGATATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39050; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142948
| Blastp | GRF1-interacting factor 1 from Arabidopsis with 55.98% of identity |
|---|---|
| Blastx | GRF1-interacting factor 1 from Arabidopsis with 68.35% of identity |
| Eggnog | synovial sarcoma translocation gene on chromosome 18-like(ENOG41128HA) |
| Kegg | Link to kegg annotations (AT5G28640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451238.1) |
| Pfam | SSXT protein (N-terminal region) (PF05030.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |