Ll_transcript_141022

• Id Trinity: FTRINITY_DN54040_c2_g1_i2
• Name Transcript: Ll_transcript_141022
• Sequence: TCTGTAATTTCAACTCGCGGTGTCGAAAATGGGAAAGGGGTAAATTTTGCATCTAGGGTTTATGCTTTATATTCAACACCATCATCAAATTCTCTTCCAC AACAATTCATAAAAAAAAATTGAAAATTTCTGGTTCTTCACTGCATCTATGGCTTCCAGGGACAAGGAACAAGCTCCTCGGAACCATCACCACCATCTCT TGAGCAGCCTCGTCGTCCGCCCCGAAGTCACCTCCGTCGCCGATACCGGCGCTGATCGCGGCGGCGATTTCGAGCCCGGAGAATTCCGCCGTGATCATCG TTCCCCTTATTCCCGCTCTGATCGATATTCGGGTGATGCTGCTCTGATGATGAAGGCCTGTTGCTGTGAATTCAGTTTTGGATCATGATCTGGGGTTGTT TTTTAGTTAAAAGGGTTAATAAGTGTGTTGGATGATGGAAATAGTCCATTCTGCGTGAGAACTTGTGAGGTTTTGTACCATGAAATCTGTTCTATGGGTT CTCATTTTGCTGAGTCATGGTCATATGTTTGATTTGGATCATTTGTGAAGACAGTGTCAAGTTTAATGGAATATGGGATAGAATCACACGGTACCACGTG ACTATCACTGTGGTCACATGATTTGTCGAGGACTACGACTGACCACTGCTATTTGTTTTTGGGGAATAAACTTACACTATAACCAATGTTTGTCTGCTAT ATTTGGGTTCCATGGGGTATATTTGGGTTCCATGGGATATATTTAGTTTCCACCGCAAGAAGTTCTTCGTAGCTGGATGAAATGCTTCCATTACTGAAAC TGATCTGACATTATGGAATGGTAACGTTTATTGATGATAAGCTTCATATCGTTATCACTTATCTATGGTCATTTGAAATCCAGCTACACGTGTATGGTTT TCCTTTGGAATCTTAATATTTTTTGTAGCTGGTGATTGTCATTTTAGTTTCTTTGGTATTTTCTTGTTTGGGTGGTTAATAAGAGATGATTAAGCTGGTT GTTTATTTACAACATGGAAAGATGATTCTCAGATTAGTAATTCCATGTGGAAGTTTAGGGACTTTGTTATCATGTGATTGTGTCTGCCAAATCCATAATA GCTTTCATATTGATGCATTATGTGGGGGTAACGACATGGTACAGAGAAGGGGTGCATATCTGCTAAAATTTGAGGGAGTGCACTTTGCCATGTCCAATTT CATTCTCCAACTGCTTTGGTGTTACTTAGGGGTGGTATTGACATTGTTCTACACAACTTCAACAGGGTTTATCTGCATGGGTCATTGTTGTGAAAATTTG TGAATTATGTTGCTTTGAATCTACCTTTGGGTGGCGCAGCATACTGGGGAGATGGTTGCAAAAACAGTCGAAGTCTCAAAGAGGTGGTTGATGGTTGCAA GATACCAAACTTTGGGATTCTTCACTCTGTTGTGGCGTTTGTTGGTGGTTATTTCTTTGTGGTGTACTTTCTGTTCTTATGCTCCTGAATATGATCACTT TCTAAAGGGTGAAATGACATTGGTGTATTGTTTGTCATGTCGGATTAGGTTTTTCTATGGGTGTTAGCTCATACTTTTGTCGAGGTTTTGAACTTTGTTC TTATTTTATCCTGTAGTGCATAGGTCCAAAATTTGGATTTGATATTTCTGATGCTTAGGTTAAATGATATTTGTATGCTTAACTATATCATGGTCTGACA TTGCATTCAGAGATTGATAGAATTGAGATCAAGGATATAAAAGAGGTAGCTTATGTGTCACGGAAAGCCCTGCCCATAGAACCTGTTTGCTTTTTGGTAA TATGGATCAGGTGTTTGTAAAGTGACATTGAAGGTGCTATCAATAAACTTCCTGCACTTTTAATTTACATATCCTTGAGGAGGAGAAGCCCTGTGTGGTA GTAACCTTCCCTTTGAAATGTCAGGGTTATATGGCAGTTGCATGATCACAAGTTTTTGGATTCTACAGTAGATTGCAATGCTAAATTTTGCCTCAAACTC TGTAAGTTGCTTATTTTCAGATTTCATTGTCTTTGTTTTCCCAGGGTATAGAATTCGCGCAGGTTCTGCATCTCCGGTACACCGTAGAGATGCAAATCAC CGCTTTGGTTCTGATTATAATCACTTATCACAAAGCCGTGGATATGGCGGCGGGAGAGATCCTGGTAGATATAGAGATCCTTCACCTCCTTATTTTCGAG GAAAAGTAGGTGGCAGACCAGTTGGTAGAGCTTTTGACAGGCCTGGCTTTGTTCCTGGGCTAGCTAGAGGAGAAGGGAACAGTAGAAACAACCCTAATGT TCGTCCAAGGGAGGGTGATTGGATTTGTCCTGATATCCGGTGTGGTAATCTTAACTTTGCAAGGCGTGACTACTGTAACAAGTGTAATAGGTCTCGACCT GCACCCGCCGAGAGTCCCCGGAGGGCATATCCTGGTCCTCCACCACTTCGTAGTTCTCCTAGACGCTTTCCTGGTTCCCCAGAAAGGACTGTGATTGGCT ATAGATCTCCTCCTCGTGGGTTGGCAAGGGATGGACCTAGAGAGTACGGATCTGCTGCTCTGCCACCCCTCAGGCATGAAGGCAGGTTCACAGATCCCCA TCTGCATAAAGACAGGATCGATTACCTAGAAGATGCTTACAGGGGGAGGAACAAGTTTGATAGGCCACCACCCCCACTAGAGTGGGAAAGTAGAGACCGT GGAAGAAATGGTTTCTCCAATGAGCGGAAAGCATTTGAGAGGAGGCCACTGTCTCCCCATGCACCACTGTTGCCGTCACTTCCTCCACACCATGGTGGTC GGTGGGCTCAGGATGTTAGAGAGAGGAGCCGCTCTCCAATAAGAGGCAGCCCGCCACCAAAAGATTATCGCCGTGATATGTTTGTGAATCGAGGAAGAGG TGATAGACGTGCCTTGGGACGTGACAGAACTGGAGGAATGTATTAGCTGCTGGACTTGCTGCAATTTGTGATGTAAACTGTAGCTCTATTAAATGTTGAA GCTTGTTAAGTTAAAGAGATTAGTTCTTGAATCTCAGGATTAGGGTAACGTACTGAAAAACCATTGTTCTGAATTGCTTGACATATTTAGGCTTTTGTTC TAATCTGTATACTGTTTGAAAAAGGAGAATACACAATTTTTTGACTCCAACTTCTGGATCTCCACTCTATTTTTTAAATGATATTTGGTTGCCTGTTTAT AGATTATATTCTTGAGAATGTGATACATGAGAGAATCACTTTCTAACAAAGGTGAGAATTAAGTTTTCATTTCAAGGAATGTAAAATGTTTTCATTTAGC TACATTATTTCTTAGCTATTTTAGTGAAATTGGATTTCTTAATTTAGATTAATTCATTATTTATTGTGTCATAAGATCTATTCATGTAGTTACCTCATTC CTCAAACGTTTTTACCCGGTAGGCCAAGATACGTGA
• Tissue: flowers
• Gene name: LI_gene_39175;
• Additional information: details;

Expression of Ll_transcript_141022

FPKM

• FPAB: 7.2
• FPNAB: 6.3
• LF1: 6.6
• LF2: 10.7
• LF3: 8.6
• LF4: 6.5
• UF1: 6.6
• UF2: 9.8
• UF3: 8.1
• UF4: 7.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_141022

• Blastp: Zinc finger Ran-binding domain-containing protein 2 from Sus with 56.41% of identity
• Blastx: TATA-binding protein-associated factor 2N from Homo with 64.29% of identity
• Eggnog: Zinc finger, RAN-binding domain containing 2(ENOG4111QXA)
• Kegg: Link to kegg annotations (733651)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448374.1)
• Pfam: Zn-finger in Ran binding protein and others (PF00641.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;